KEGG   Candida dubliniensis: CD36_34740
Entry
CD36_34740        CDS       T01140                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein, putative
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cdu  Candida dubliniensis
Pathway
cdu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CD36_34740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cdu03041]
    CD36_34740
Spliceosome [BR:cdu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CD36_34740
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th eIF2A Beta-prop_VPS8 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SCAP Cytochrom_D1 RMC1_N
Other DBs
NCBI-GeneID: 8049450
NCBI-ProteinID: XP_002422416
UniProt: B9WMV7
LinkDB
Position
R:1991579..1992937
AA seq 452 aa
MEVDKIDHEIEEELVEKEEEEEDEVYYTPGPKELYDVRLKILNYSLKQSANRLQKLRQLK
QSATTTKTSTTTTTKIPSQDEINILKSRRQLNSNLSKYEIYGSQFIPGNTRTISNIKISN
NDKYIACGSWDGSINILNNQDLSIFKTTSTSSSSSSSSLSQVSHTEKVSGLSWNNDSSRL
VSGGNEGMINIWDVNDNSDDDDNLLSSIVSIKAAHNDRITKTMFHPIDNLIISTSFDQTW
KLWDLNKLSPPQQQNDPPQCLMEQEGHSKPVFTGSIHPDGGLFMSGGLDGIVHIWDLRSG
RSIVTLQKHMAGIYCLDWSPNGYQFVTGSGDCSLKIWDLRKLGNNNNELYSIPAHTKLIT
DVKFYHQGKDVIQKQKQKQKQQEQILGPEFNNGKFLVSCSYDGDVNIWSSDNWIKIKSLK
GHTDKVMSCDINSTGEWIVSSGWDRSIKLWKQ
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggaagttgacaagatagatcatgaaatagaggaagaactagtagaaaaggaagaggaa
gaagaggatgaagtttattatactccaggacctaaagaattatatgatgtcagattaaaa
atattaaattattcattgaaacaatcagctaatcgattacaaaaacttcgtcagctaaaa
caatctgccaccaccaccaaaacatcgaccaccactacaaccaaaataccatcacaagat
gaaataaatatattaaaatcaagacgacaattaaattcaaatctatcaaaatatgaaatt
tatggatctcaattcataccaggaaatacaagaacaatatcaaatatcaaaatatctaat
aatgataaatatattgcttgtggatcatgggatggttcaataaatatattaaataatcaa
gatttatcaatttttaaaacaacatcaacatcatcatcatcatcatcatcatcattgtca
caagtttcacatactgaaaaagtatcaggtttaagttggaataatgatagtagtcgatta
gtatcaggaggaaatgaaggaatgattaatatttgggatgttaatgacaatagtgatgat
gatgataatttattatcatcaatagtttcaattaaagcggctcataatgatagaattacg
aaaacaatgtttcatccaattgataatcttattatttctacatcatttgatcaaacttgg
aaattatgggatttgaataaattatcaccaccacaacaacaaaatgacccaccacaatgt
ttgatggaacaagaaggtcattctaaaccagttttcacaggatcaattcatcctgatggt
ggattatttatgagtggtggacttgatggtatagttcatatttgggatttacgatcaggt
agatcaattgtaactttacaaaaacacatggctggaatatattgtttagattggtcacct
aatggatatcaatttgttactggtagtggtgattgtagtttaaaaatttgggatttaaga
aaacttgggaacaataataatgaattatattctatacctgctcatactaaattgattact
gatgttaaattttatcatcaaggtaaagatgtaatacagaaacaaaaacaaaaacaaaaa
caacaagaacaaatattgggaccagaatttaataatgggaaatttttggtaagttgttca
tatgatggtgatgttaatatttggtcaagtgataattggattaaaattaaaagtttgaaa
ggtcatactgataaagtaatgagttgtgatattaatagtactggtgaatggatagtaagt
agtggttgggatagatcaataaaactatggaaacaatag

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