KEGG   Candida dubliniensis: CD36_43000
Entry
CD36_43000        CDS       T01140                                 
Name
(RefSeq) U2 snRNP component, putative
  KO
K12828  splicing factor 3B subunit 1
Organism
cdu  Candida dubliniensis
Pathway
cdu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CD36_43000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cdu03041]
    CD36_43000
   03036 Chromosome and associated proteins [BR:cdu03036]
    CD36_43000
Spliceosome [BR:cdu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CD36_43000
 Complex B
    CD36_43000
 Complex C
   U2 SnRNP specific factors
    CD36_43000
Chromosome and associated proteins [BR:cdu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CD36_43000
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ GNC1_N HEAT_EF3_N Htt_N-HEAT_1 XMAP215_CLASP_TOG UTP20_C MMS19_C Sec7-like_HDS FANCI_S2
Other DBs
NCBI-GeneID: 8047705
NCBI-ProteinID: XP_002419962
UniProt: B9WG08
LinkDB
Position
4:672516..675803
AA seq 1095 aa
MKQNMAPIERKRNLAGNYSIPESLNKELRKEFAEDVSTPMDKLQDDIINQNNYNKKRFQR
SIVLDLDEQKSYKQIMNERNLEREELRVEKLIKEKGEGATQTIESTQEKLLPRKRKQRWD
VSPEEYKRQKESEESNELVKHSTSSLIAELVQGKVPVVKGIPLTDSILEKILPPGYIKVN
PPAHFKQNEETLPPDLSDAVTTTSEYYLPPTNESVSISTTEIPTDVPGVKGLEFFKEEDM
KHFGKLVHSNPESLNDEEKKELNAMKLVLKIKNGSPITRKRAMKQLTNNALRFGPKVLLN
QILPILLEPNLTPQERHLLIKMIGRIIYQLDELIRPYTSKVLTVISPFLIDEDPTVRLET
REIISGLTKAVGLANIISTLRPDLDHVDEYVRNLTARIFAIVANTLGLKSFLPFLKAVIK
SKRNWTARHTGIKIIQQLCIMLGQGNGTTILPYLSNIVEILKPPINDESLQVRTITALTL
AQLADNVSPYGIDSFEPILEPVWFGIRKHRGKGLASFLKCIGAMIPLMSYDPNYEDYTNY
YTTELMHIITREFKSPDEDMRKTILRIIMGLPLSRKLIPGYEKSIVKPFVNAFWNRRTAS
DSTQITRLVVEATNHLAIKFDFLDMLEHIVYFTKDDNEQLRKLAIEAVNKLISNNRQELI
GMDSQLDRKLVDGVLFAFQKQTQHQKIYLTCFGTLADALNVRLKPHLNSILSTILYRMKN
KLAEIRQQASDLIAIIAPVIKQCSEHDDELLMKLILILYESLGEVYPEVLGSILNALYSC
LDSIDKATLYTMSNPSINQILPTLTPILKNRHEKVQEACIKLVGLIARKNSETINAKEWM
RICFDLLEMLKAQRKRIRIAANSTFGYIAKTIGPQDVIVMLLNNLRVQERQLRVCTAVAM
GIVAETCLPFTVLPAIMNEYRIPEKNVQNGVLKAMSFMFEYLDGKITKDYLFAITPLLED
ALTDRDLVHRQTAATVIFHIAINCIGLADNDYSDVFIHYLNLIMPNVFETSPHVISRILE
SIDALRLVIGNGTFTNYVWSGLFHPARKVRTPYWKIFNNAYVQCSDALVPCYPRIENLPD
DKELSYKLEELDLFL
NT seq 3288 nt   +upstreamnt  +downstreamnt
atgaaacagaatatggcacccattgaacgaaaaagaaatttggctggtaattactccata
cctgaatccttgaataaggagctacggaaagagtttgccgaagatgtatcgactccaatg
gataaattacaagatgacatcattaatcaaaacaattacaataaaaaacgatttcagagg
tctattgtgctagatttggacgagcaaaagagttataaacaaattatgaatgaaagaaac
ttggaaagagaagagctccgagtagaaaagctaattaaagaaaaaggggagggagctact
caaactattgaaagcactcaagaaaagttattaccccgtaaaagaaaacagagatgggat
gtatcaccagaagaatacaagaggcaaaaagagtctgaagaaagtaacgaattggttaaa
cattctacatcttcacttattgcagaattggtacagggcaaagttcctgtggttaagggg
attccattaacagattcgatattggaaaaaatattgccacctgggtatataaaagtgaat
cctcccgcacatttcaagcaaaatgaagagacattgccaccagatttatctgatgccgtg
actactacatcagaatattatttgcccccgaccaatgaatcagtaagtatttccacaaca
gaaattccaaccgatgtaccaggagtaaaaggcttggaatttttcaaagaggaagatatg
aagcattttgggaagctagttcattcaaacccggaatccttgaatgatgaagaaaagaaa
gaactaaacgctatgaaactagtgttgaagataaaaaatggatcgccaatcacacgtaaa
cgggctatgaaacaattaaccaataatgccttgagatttggtcccaaagttttattaaat
caaattcttcctatattattggagcctaacttaactccccaggaaaggcatttgcttatc
aaaatgattggaagaattatataccaattagatgagttaattcgaccatatacttcaaaa
gtccttactgtcatatcgccattcttaatagatgaagaccctacagttagattggagaca
cgggaaatcatttctggtttaaccaaagcagtgggtttagcaaatattatatcgacatta
aggccagacttggaccacgttgacgagtacgtccgaaacttgacagcacgaatattcgcc
atagtggccaacacgttaggtttaaaatcatttttgccattcttaaaagcagtcatcaag
tcgaaaaggaattggacagcaagacacaccggtatcaaaataattcaacaattgtgtatt
atgctagggcaaggaaatggtaccacaatattgccatatctttcaaatatagttgaaatt
ttgaaacctccaattaatgacgagtccttacaagttagaactataacagcattaacttta
gctcaactagctgataatgtgtcaccatatggcattgattcgtttgaaccaatattggaa
ccagtttggtttggaattagaaaacacagagggaaaggtttggctagtttcttaaaatgt
attggggccatgatcccgttgatgtcgtatgatcccaattacgaggattacactaattat
tatactacagaacttatgcatatcataacacgtgaattcaagtctcctgatgaagatatg
agaaagactattttgcgtattataatggggttacctttgtcgagaaagcttattccaggt
tatgaaaaatcgattgtgaagccatttgttaatgcattttggaatcgtcgtactgcttca
gattcaacgcaaatcacgaggctagtagtggaagcgaccaatcatttggctattaaattt
gatttcctagacatgttagagcacattgtatactttacaaaagacgacaatgaacaattg
cggaaattggcgattgaagctgttaataaattaatttccaacaatagacaagaattgata
ggtatggattcccaattggatagaaaattggttgatggtgttttatttgcctttcaaaag
caaactcaacaccaaaagatatacttgacctgttttggaacattggcagatgctttaaat
gtaagattaaaacctcatttaaattcaatactaagtaccatcttgtaccgaatgaagaat
aaattggcagagataagacaacaagcttcagatttgattgctattatagctccagtgatt
aagcaatgttcagaacatgacgatgaattgttaatgaaattgatattaattttgtatgag
tcacttggtgaagtctacccagaagttttgggatcaattctaaatgcattatattcatgt
cttgattcaattgacaaagcaacattatataccatgtcaaatccttcaatcaatcaaatt
ctaccaacattaaccccaattttgaagaatcgacacgaaaaagttcaagaagcatgtatt
aaattggtgggattaatagctagaaagaattcggaaaccataaatgcaaaagaatggatg
cgtatttgttttgatttgttggaaatgttgaaggctcaacgtaaaagaattcgaattgcc
gctaacagtacatttggctatattgccaaaactattgggcctcaagatgtaatagttatg
cttctaaataatttacgtgttcaagaacgtcaattaagagtttgtacagcagttgcaatg
ggtatagttgctgaaacttgtttaccatttactgttttgccagcaatcatgaatgaatac
agaattcctgaaaaaaatgtgcaaaatggtgtattaaaagcgatgagttttatgtttgaa
tatttggatgggaaaatcacaaaggattatttgtttgctataacacctttgctagaagat
gcattgacagatagagatttagtacatcgtcaaactgctgcaacagtgatttttcatata
gcaataaattgtattggattagccgataatgattatagtgatgttttcattcattacttg
aatttgattatgcctaatgtttttgaaacatcaccgcacgtgatttcaaggattttggag
agtatagatgccttaagattggttattggtaatgggacttttacaaactacgtttggtct
ggattgtttcacccggcaaggaaagtcagaacaccatactggaagattttcaataatgca
tatgttcaatgcagtgatgcattagttccgtgttatccaagaattgagaatcttccggat
gacaaagagttaagttacaaattggaagagttggatttgtttttatag

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