Candida dubliniensis: CD36_43750
Help
Entry
CD36_43750 CDS
T01140
Name
(RefSeq) RNA polymerase II transcription factor B subunit, putative
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cdu
Candida dubliniensis
Pathway
cdu03022
Basal transcription factors
cdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CD36_43750
09124 Replication and repair
03420 Nucleotide excision repair
CD36_43750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdu03021
]
CD36_43750
03400 DNA repair and recombination proteins [BR:
cdu03400
]
CD36_43750
Transcription machinery [BR:
cdu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CD36_43750
DNA repair and recombination proteins [BR:
cdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CD36_43750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
PhaP_Bmeg
Motif
Other DBs
NCBI-GeneID:
8047868
NCBI-ProteinID:
XP_002420032
UniProt:
B9WG78
LinkDB
All DBs
Position
4:898734..900752
Genome browser
AA seq
672 aa
AA seq
DB search
MDIIRGACSVDKVGGMVYIREDLAPSMLEWKPIDEQEEDRAISIPLNSLTTLQSTKETSP
KMILKIVYKLTSGPSNSEETNNNEEEKSFKLIFTNRPTMNTIKDSLQTIVARSRTRVEGT
STPTPALGSMTQADSTRDSTSTPIPASSSSPSGTLNTSSSLLSLAASQSLSDANLLKNFE
LQQKLLLEDRELRDIFTKSVMQFKLSPQIFWSSRLNQLRTFALTISQHKGPYNVLSTIKP
VATSDNQVNVNVTRDTINEIFTIYPIIKKAFDDLVPNKFSEGEFWSRFFNSKLFRRLRGD
KISISNSRGDVVLDKYLYIDQNYQDKLQKSSASEKGETGGSENDVAIPETPHVNKFLDLM
GNQQDNSQKLGNRPDFTMRYDDEETNLDNNNNKKKPALGNENEMIILMKNMNRLSSKMMS
MSSAKEVEKPQTTTIDGLSAAEINEYEEELDLHDLNDFENLQYIKLNINPDIAKGTNIDH
DSNTNNEISQDELHKYLQSQSFHGQIELTETYTSKSEEIEKTSMEIAMLIKQNFRTFKLI
NKENDITGTNIVPNSLIQEIITYNITIIEFLSHFWKIFLHGNNPGQLKKIFTSLKNCQSG
LIELENKAINQFKSMDILEKNQKLQDKVLKDFVSCLQPMKIALDKACNEYVEAVRKAKPE
LNENGKRPLPEE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggatataattagaggtgcatgttcagttgataaagttggagggatggtgtatatcaga
gaagatttagcaccgctgatgttggaatggaaaccaattgatgaacaagaagaggataga
gcaatttcaataccattgaattctttaaccacattacaaagtacaaaggagacttcaccg
aaaatgatcctaaaaatcgtatacaaattaacctctggtccatctaattcagaggaaact
aataacaatgaagaagaaaaatcattcaaattgatattcaccaatagaccaacgatgaac
actattaaagattctctacagacaattgttgctagatcaagaaccagagtagaaggtact
agtacaccaacaccagcacttggatcaatgacacaagctgactccactagagattcaaca
tcaacaccaatacctgcatcatcatcatcaccatcaggaacattaaatacttcatcatca
ttactatcattagcagcatcacaatcattatctgatgcaaacttgttgaaaaatttcgaa
ctacagcagaaacttttactagaagaccgtgaattacgtgatattttcactaaatcagtc
atgcaatttaaattgtcaccacaaatattttggtcatcaagattaaatcaattacgaact
tttgccttgacaatatctcagcataaaggtccatataatgtgttgagtacaattaaacca
gtggcaacatctgataatcaagtgaatgttaatgttacgcgtgataccattaatgaaata
ttcaccatttatccaattataaagaaagcttttgatgatttggttcccaataagtttagt
gaaggggaattttggtcgagattttttaattctaaattatttagacgattaagaggagat
aagattagtatcagcaatagtcgaggagatgttgtattggacaaatatttgtatatagat
caaaactatcaagataaattacaaaaatcatctgcttcagaaaagggagaaacagggggt
tcagaaaatgatgttgcaataccggagactcctcatgttaacaagtttcttgatttgatg
gggaatcaacaagataattcccaaaaattggggaatagaccagattttactatgcgttat
gatgatgaagagacaaatttggataataataataataagaagaaaccagctttagggaat
gaaaatgaaatgatcatattaatgaaaaatatgaaccgattatcatcgaaaatgatgagc
atgagttctgctaaagaagtagagaaaccacaaacaaccaccattgatgggttatctgct
gctgaaattaatgaatatgaagaagaattagatttacatgatttaaatgattttgaaaat
ttacaatatataaaattaaatattaatcctgatattgccaaaggaaccaatattgatcat
gattcaaataccaataatgaaatttctcaagatgaattacataaatatttacaatctcaa
tcatttcatggacaaatagaattaactgaaacttatacttcgaaaagtgaagaaattgag
aaaacttcaatggaaatagccatgcttattaaacaaaatttccgaacatttaaattgatt
aataaagaaaatgatattactggaacaaatattgttcctaattctttaatacaagaaatt
attacttataatattaccattattgaatttttatctcatttttggaagatttttttacat
gggaataatcctggtcaattaaagaaaatatttactagtttaaaaaattgtcaatctggt
ttaatagaattagaaaataaagctattaatcaattcaaatctatggatatattagagaaa
aatcaaaaattacaagataaagttttaaaagattttgtatcatgtcttcaaccgatgaaa
atagcattggataaggcatgtaatgaatatgttgaagcagtaaggaaagctaaaccagaa
ttaaatgaaaatggtaaacgtccattaccagaggagtaa
DBGET
integrated database retrieval system
