Candida dubliniensis: CD36_46590
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Entry
CD36_46590 CDS
T01140
Name
(RefSeq) DNA mismatch repair protein MSH2, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
cdu
Candida dubliniensis
Pathway
cdu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CD36_46590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdu03400
]
CD36_46590
DNA repair and recombination proteins [BR:
cdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CD36_46590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_22
AAA_27
Tab2-like_C
Motif
Other DBs
NCBI-GeneID:
8047807
NCBI-ProteinID:
XP_002420299
UniProt:
B9WF67
LinkDB
All DBs
Position
4:complement(1611118..1613739)
Genome browser
AA seq
873 aa
AA seq
DB search
MSSTKIDLKFSDLADERSYFKKYAQLPPKESTTIRFIDHNNHDYFTALGSDADLIAEKIY
RTQSVIKHHNQTKYVTISPQNFKESLNYCLQNHLKVEVYHSKTFQLISSGTAGNLDSLSE
EFDIDFDFKDGSSSSIAAIKLGSKVGVCVIADSIVHLSEFEDNELYSNLESLLIQLGVKE
VVIPANVDNKKFFQMLEKINDLVVSAAKSFPKDNEQDISKLLDTENLELTLAAKGINSLD
YSSALSCCGALIAYLDLLNGDKTFEINKYNLSTFMKLDSSTMKALNILPNGTQRAITSIF
ELFKCKTLAGSRLLAQWLKQPLIDLPLIEERQELVKSMIDDTSLRVETQEFLSKVPDINR
LLKKVSLGVKRSGAENKKLNEVVNLYQLVSLLPNLTEILTVDYYAKPLKKDEQALSKFCE
LVETTIDLDTSFDKDYKIKPDFDPSLSEISNTMEAAFKAINDLYLEAGDDLNLDTASNKL
KLEQHQTHGWCMRVTRNDSRVLRGKSQYKELQTVKSGVFFTTIEMKRLSQEYAKAYDEYN
VKQSEVIKEILSLTLTYEPVLQSLSSTLAHLDVITSFATTAMLNSYTQPKLFPFESARKI
NLIESRHPLLEVQDDVNFISNDVKMGDKHFAIITGPNMGGKSTYIRQIGTIALMAQVGSF
VPANEGAELPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATANSLIIIDELGRG
TSTYDGFGLAWAISEELIKRKCFAVFATHFHELSQLSEKYDGVENLNLMAEQTNEDITLI
YKVGPGISNTSFGISVAEKLHMPEKIINMAKRKVEELSEEPPIKKQCSEIEIREGMSRLR
EILKEWRNNPEINIAESLSKEPNKFINYIVDTL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaccaaaatagatctcaagttcagtgacttggctgacgaaagactgtatttc
aagaaatacgcacaacttccaccaaaggaaagcaccacaattagatttattgaccacaac
aaccatgactattttactgcccttggatctgatgccgatttgattgctgagaaaatctac
agaacacaatctgtgattaaacaccacaaccagacaaagtatgtgaccatttcaccccaa
aactttaaggagctgttgaattattgtttgcaaaatcatcttaaagtagaagtttatcat
agcaaaaccttccagttgatctcgtctggtaccgcaggaaacttggatagtctttccgaa
gaattcgacattgattttgatttcaaggatggctcgagctcatccatagctgcaatcaag
cttggaagtaaagtaggtgtttgtgtgattgccgattccatcgtgcacttgtctgaattc
gaggacaacgagttgtactcaaacttagaaagtttgttgatccaattaggcgtcaaggaa
gttgttatcccagcaaatgtcgacaacaagaagtttttccaaatgttggagaaaataaac
gatttggtggttagtgcagcaaagtcgttccccaaagacaacgaacaggatataagtaaa
ttgttggatactgagaatttagaattaacgttagctgcaaaaggcataaactcacttgac
tattcatcggctttgtcatgttgcggcgctttaatcgcctacttggatttattgaacggc
gacaaaacttttgaaattaacaaatacaatttatcgacttttatgaaattggactcatcc
accatgaaagcgttgaacattttgccaaatgggacacagcgggccatcacatctattttt
gagttgttcaaatgcaaaactttggctggctccagattgttagcacagtggttgaaacaa
ccgttgattgacttgccattgatcgaggagcgtcaagaattggtaaagtcgatgatcgat
gacactagtttgagagttgagactcaggagttcttgtcaaaggtaccagatatcaatcga
ttacttaaaaaagtgagtcttggtgttaaacgatccggcgctgaaaacaaaaaattgaat
gaagtggtcaatttgtaccagttggtactgttgctccccaacttgacagaaatcttaact
gtcgactattacgcgaagccacttaaaaaggatgaacaagctttatccaagttttgtgag
ttggtcgaaaccaccatcgaccttgatacactgtttgataaggattacaaaataaagcca
gattttgatccatctttgtcggaaatttccaacaccatggaagcagcattcaaggctata
aacgatctttacttggaagctggcgatgatttgaatcttgacaccgcgagcaacaaatta
aagttagagcaacatcaaacccatgggtggtgcatgagagtaactagaaatgattcaagg
gttttaagaggtaaatcccaatacaaggaacttcaaacagtaaagtcgggtgttttcttt
acaaccatcgagatgaagagactttcgcaagagtacgccaaggcctacgacgagtacaat
gtcaagcaatccgaagttatcaaagagatcttgtctctcaccttaacatatgaaccagtt
ctccaatcactttcttcaactttggcccacttggatgtcattactagttttgccaccact
gctatgctcaattcatacacacaacccaaattgttcccctttgagtctgctcgtaagata
aatttgatagagtcgagacacccccttctcgaagttcaggatgatgtaaactttatttcc
aacgacgtgaaaatgggtgacaagcactttgccataatcacagggccaaacatgggaggt
aaatctacatatattagacaaatcggtaccattgccttgatggcacaagttgggtcattt
gtacctgccaacgagggggcagaactaccaattttcgatgctatattatcacgtgtgggt
gccggtgactcacaattgaaaggtttatccacatttatgattgaaatgttggagacttcg
tcgatcttagccactgccactgctaactcattgattataattgacgagttgggtcgagga
acgtccacttacgacggattcggcttggcatgggcaatatctgaagagttgatcaaaaga
aaatgttttgcagttttcgcaacccatttccatgaactaagccagttatcagaaaagtac
gatggcgttgaaaatttgaatttaatggctgaacagacaaatgaagacatcacattgatt
tataaggtcggaccgggtatttcaaatacttcgtttggtatttctgtggccgagaagtta
catatgccagagaagattatcaacatggctaaaagaaaagttgaggagttaagtgaagag
ccaccaattaaaaagcaatgctctgaaattgaaatcagagaagggatgagcagattacga
gaaatcctaaaagaatggagaaacaatccggaaattaacatagcagagtccttatctaag
gagcccaacaagtttataaattatatagttgacactttatag
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