KEGG   Candida dubliniensis: CD36_51440
Entry
CD36_51440        CDS       T01140                                 
Name
(RefSeq) WD-40 repeat domain-containing protein, putative
  KO
K12880  THO complex subunit 3
Organism
cdu  Candida dubliniensis
Pathway
cdu03013  Nucleocytoplasmic transport
cdu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CD36_51440
  09122 Translation
   03013 Nucleocytoplasmic transport
    CD36_51440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdu03019]
    CD36_51440
   03041 Spliceosome [BR:cdu03041]
    CD36_51440
Messenger RNA biogenesis [BR:cdu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CD36_51440
Spliceosome [BR:cdu03041]
 Complex C
  Other components
   EJC/TREX
    CD36_51440
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CD36_51440
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_WDR5 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_EML WDR55 EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_IFT122_1st Beta-prop_TEP1_2nd Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_pof12 Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_RSE1_1st Beta-prop_DCAF4 Beta-prop_WDR41 SdiA-regulated Beta-prop_IFT122_2nd Beta-prop_RSE1_2nd SPP1_Dit WD_LRWD1
Other DBs
NCBI-GeneID: 8048139
NCBI-ProteinID: XP_002420448
UniProt: B9WH85
LinkDB
Position
5:complement(366310..367326)
AA seq 338 aa
MPSANDRNIKFFNSLIPIVLIDKPISSYAPSEIITVAINQTGTRVVYSRTDRSIRIWKCL
PESVIDPKTIFDAHSKAVECLSFNPMTEFTFATVAKDEYIKIWNANTGDKLHEIKCEFDS
LKLVRYSNDGQLLVVVDRASNFLFFNVGANYKLIHQFKLDEHIYDLKWFNHDHQFFLVSS
HDGSILLYEIIDGDEDNELSSKLRASVSGHNSSITTIAISPKGNYFTVGSSEGVISFWKT
LENLINSKVITDVDQSIAQLDISRDGTYLAVAYDTDSNSRIYEAEGGEMVHEIPNSSSGN
QTFSSITWFPTKTGFAYTSDHGTVLTVMNKPIEKKHRR
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgcctagtgcaaatgatagaaatataaaattctttaatagtttaattccaatagtatta
atagataaaccgatctcgagttatgctccatcagaaattataacagttgcaattaatcaa
actggtactagagtagtctattcacgtacagatcgatcaataaggatttggaaatgtctt
cctgaatcagtaattgaccctaagactattttcgatgcccatctgaaagcagtagaatgt
ttatcatttaatcccatgacagaattcacatttgcaacagtagctaaagatgaatatata
aagatttggaatgctaatacaggagataaattacatgaaataaaatgtgaatttgattca
ttaaaattggttcgttattcaaatgatggtcaattgttggtggttgttgatagggcgtcc
aattttttatttttcaatgttggagccaattataaattaattcatcaattcaaattagat
gaacatatatacgatttgaaatggtttaatcatgatcatcagtttttccttgtttcttca
catgatggaagcatacttttatatgaaattatcgatggtgatgaagacaatgaattatct
tcaaaattacgagcactggtgtctgggcataactcttcgattaccaccattgccatatca
ccaaaaggtaattattttactgttggaagtagtgaaggagtaataagtttttggaaaact
ttagagaatttgattaatctgaaagttattactgatgtcgatcaaagtattgcccaattg
gatatcagtagagatggtacttatttggcagttgcgtatgatactgatagtaatctgaga
atatatgaagccgaaggtggtgaaatggttcatgaaatccctaatagttctagtgggaac
caaactttcagctcgataacatggttcccaacgaaaacaggatttgcgtataccagtgat
catggtacagtattaacagttatgaataagcctatagagaagaaacataggcgataa

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