Candida dubliniensis: CD36_52260
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Entry
CD36_52260 CDS
T01140
Name
(RefSeq) pre-mRNA polyadenylation factor, putative
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cdu
Candida dubliniensis
Pathway
cdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CD36_52260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_52260
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CD36_52260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Orbi_VP6
Motif
Other DBs
NCBI-GeneID:
8048044
NCBI-ProteinID:
XP_002420531
UniProt:
B9WHG8
LinkDB
All DBs
Position
5:577689..578594
Genome browser
AA seq
301 aa
AA seq
DB search
MANSDDDDAFLYSDEEQQVEEQQPKTKRVKFADEESKKEDKSKEKEQQQKEEHTDGASDS
ESGSGSESSSESDSDDDIDIIIGDNQPTKSKSSGTTIIGNEALSEMTDPEASSSSSTAGA
GAASGSNKRQSTSTVDLDSVPRYQEGEDGEGEGTLITQLDIETLKLKPWRAPGVDVSDYF
NYGFDEFTWLAYCHKQDKLRGEFNPQKVMENIMKGPGGANGVNSGDKTGQQQQQQQQPPQ
PPMGMMMPPPGFMANMPMPPMGSMPPMPNMPNMANMPPPPPGFNGQFPAPYNIPHNMNQK
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcagatgacgacgatgcttttctttattcagatgaagagcaacaagttgaa
gagcaacaaccaaaaactaaaagagtgaagtttgctgatgaagaaagcaaaaaggaagat
aaatctaaagaaaaagaacaacaacagaaagaagaacacactgatggagcatctgattct
gaatcaggttcaggttcagaatcaagttcagaatcagactcagatgatgatatagatatt
ataataggtgataaccaaccgacgaaatcaaaatctagcgggacaaccatcattgggaat
gaggcattatccgaaatgactgatcctgaagcatcgtcatcgtcgtcgacagcgggagca
ggagcagcatcaggaagtaacaaaagacaatccacctcaactgttgatcttgattcagtg
cctagatatcaggaaggagaagatggagaaggagaaggtactttaataactcaattagat
attgaaacattgaaacttaaaccgtggagagcaccaggtgttgatgtatctgattatttc
aattatggatttgatgaattcacatggttggcttattgtcataaacaagataaattaaga
ggcgagttcaatcctcaaaaagtgatggaaaatattatgaaaggtcccggtggtgctaat
ggtgttaattcgggtgataaaacaggacaacaacaacaacaacaacaacagccaccacaa
ccacctatgggcatgatgatgccacctccaggattcatggctaatatgccaatgccacca
atgggatctatgccaccaatgccaaatatgccaaatatggcgaatatgcctccaccacct
ccaggatttaatggccagttccccgcaccttataacatccctcataatatgaaccaaaag
caatag
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