Candida dubliniensis: CD36_52320
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Entry
CD36_52320 CDS
T01140
Name
(RefSeq) U3 small nucleolar RNA-associated protein, putative
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cdu
Candida dubliniensis
Pathway
cdu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CD36_52320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdu03009
]
CD36_52320
Ribosome biogenesis [BR:
cdu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CD36_52320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Utp13
EIF3I
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR75_2nd
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
KNTC1_N
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_VPS8
eIF2A
Beta-prop_RIG_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
8048219
NCBI-ProteinID:
XP_002420537
UniProt:
B9WHH4
LinkDB
All DBs
Position
5:complement(591132..593504)
Genome browser
AA seq
790 aa
AA seq
DB search
MDTLKTTYAHTDIEPIYVGGTSASISTSNGELLATPLNEDVIVTNLTTNEIIYKIPGDGE
VVTNLAITPDGSYLAMISQSQLLRIFDLNKGSVVKNFKLPSPVYISSVDTTSSLFAFGGS
DGVITVWDIENGYVTHLLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRC
IHTLKDHNTAVRGVGFDRDGDLFISGGRDNVVIIYNTKNFKTLNTFPINEQIEAAGFVSL
IDERQYFYTAGSENVLKVWDIKLGEMIGRSPIPLKTNEELLIIDVIKLYNNNLYLVISDQ
TLIELDLQELTPDHEVVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDTE
KPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNDELQDFEPFARFQGHAGA
VTAISLSKSQNEPRFLITGSSDLTIKKWKIPNAPNSIVKTSEYTRRAHDKDINSIDVSPN
DEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSL
LDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIW
AMDLKNDGEFFTTADADGKLSSWTDNTEEEVKLKELQAKEKIEQEQSLSNFIKNKDWSNA
FLLALTLDHSMRLYNVIKSSIETNDDKDSIIGSFALENTISLLDDVQLVKLFKKIRDWNV
NFKFFEISQKLLNVILNNFAVDKLTEVPGLMKIMESIIPYNERHYNRIDEMVEQTYVLDY
TVEQMNKLIA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggatactctaaaaacaacatatgcacatactgacattgagccaatctatgttggtgga
accagtgctagtatttccacatccaacggtgaattattagccactccattaaatgaagac
gttatagttaccaatttaactactaatgaaataatatacaaaatccctggagatggagaa
gtcgttactaatttagcaatcacccctgatggctcatatttagcaatgatatcgcagtct
cagttattaagaatttttgaccttaacaaaggttcagttgtcaagaattttaaattaccc
tcaccagtgtacatttccagtgttgataccacatctagtttatttgcctttggtggttct
gatggggtgattactgtatgggacattgaaaatgggtatgttacccatttattgaaaggt
catggtacgacaatctgttcattaactttccatggtgaattaaattctcaagattggaga
ttagcaagtggtgataccatgggtacggttaaaatctgggatttagtgaaaagaagatgt
attcatactttaaaagatcacaacactgcagttagaggggttggatttgatcgagatggt
gatttattcatatctggaggtagagataatgtggtgattatttataataccaaaaatttt
aagacccttaacacattcccaataaacgaacaaattgaagcggcaggatttgttagttta
attgatgagagacaatacttttatactgctggactggagaatgttttgaaagtatgggat
atcaaattgggagaaatgataggcagatcacctatcccattaaagaccaatgaagaatta
ttaattattgatgtaataaagttgtataataacaatttatatttggtgattagtgatcaa
actttaattgaactagatttacaagaattgacaccagatcatgaggttgttgaattccca
attgtgaaaagaattgctggtaatcaaggtattattgctgacattaaatacgttggtcct
gaattcaatcttttagcaatggcgacaaattctccagcattaagaattgttgatactgag
aagccattagaattgagagtatacgaagggcatactgatatccttaatgctgttgatgta
tctaccgatggtaaatggatagccactgcttccaaagacaatgaagctagattatggcgt
tggaatgatgaattacaagattttgaaccattcgctagattccaaggtcatgcaggtgct
gtcactgccattagtttatcgaaatcacaaaatgaacctagatttttaattactggatcg
agtgatttaacaattaaaaaatggaaaataccaaatgcaccaaattccatagtcaaaact
tcagaatacactagaagagcccatgataaagatatcaattcaattgatgtttcacccaat
gatgaatattttgctactgcgtcatatgataagttggggaaagtatggcaaacagatagt
ggagaaactattggagttttaaaaggtcacaaacgtgggttatgggatataaatttttac
aaatttgacaaattgatagtcactgggagtggagataagacgattaaagtttggtcatta
ttggatttttcctgtaagaaaacactagaaggacataccaattctgttcaaagagttaaa
tttttcaatagagaacatcctcaattattatcatgtggtgctgatgggttaattaaactt
tgggattataaacaaggagaaatcattaaatctttggataatcatgatcaaagaatttgg
gccatggatttgaaaaatgatggagaatttttcactactgctgatgccgacgggaaatta
agttcttggacagataatactgaagaagaggtcaaacttaaagaattacaagctaaagag
aaaatagaacaagagcaaagtttgagtaactttatcaagaataaagattggagtaatgcc
tttttgttggccttgacgttggatcattcaatgaggttatataatgtgatcaagtccagt
attgaaacaaatgatgataaagattctataattgggtcatttgcattagagaacactata
agtttattggatgatgtgcaattggtcaaattatttaaaaaaattcgtgattggaatgtt
aatttcaagttttttgaaatcagtcaaaagttattgaatgtaatattgaataatttcgct
gtggataaattaactgaagttccaggtttgatgaagattatggagagtattataccttat
aatgaacgtcattacaataggattgacgaaatggtggaacagacttatgtgttggattat
actgttgaacaaatgaataagctaattgcttag
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integrated database retrieval system
