Candida dubliniensis: CD36_54370
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Entry
CD36_54370 CDS
T01140
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cdu
Candida dubliniensis
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdu03041
]
CD36_54370
03009 Ribosome biogenesis [BR:
cdu03009
]
CD36_54370
Enzymes [BR:
cdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CD36_54370
Spliceosome [BR:
cdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CD36_54370
Ribosome biogenesis [BR:
cdu03009
]
Eukaryotic type
90S particles
Helicases
CD36_54370
Pre-60S particles
CD36_54370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
8048388
NCBI-ProteinID:
XP_002420731
UniProt:
B9WI19
LinkDB
All DBs
Position
5:complement(1079323..1080993)
Genome browser
AA seq
556 aa
AA seq
DB search
MAKTSKSKGNHKKSETSKVSRKRSHEDSESEVEDNEKVVEELDADFDEVAGLLGDDIEDP
ESKSQSKKEKQKAKDEAKLEKLTKPQVSKEITEDDSENVLFENADLSEPTMRAIKEMGFT
KMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRNGTAVIIITPT
RELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLSKGVNLLVATPGRLLDHLKNTQ
FVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSATQTTKVEDLARISLR
PGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNVKKKIIVFLSSCNSVKF
YSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQF
DPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLRYLKAAKVPLNEYEFPANKIAN
IQSQLTKLIKTNYLLNQSAKDGYRAYLQAYASHGLKTVYQIDKLDLKKVSASFGLDQVPR
VNLSIGGTKTKKQKRS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacttccaaactgaaaggcaaccataagaaatctgaaacctcaaaagtgtcg
agaaaaagatctcatgaagattcagaatctgaagttgaagataatgaaaaagtagttgaa
gaattagatgctgattttgatgaagttgcaggattattaggtgacgatattgaagatcct
gaatcaaaatcacaatcaaagaaagaaaaacaaaaggcaaaggatgaagccaaacttgaa
aaattaaccaaaccgcaagtatccaaagaaattaccgaggatgattccgagaatgtatta
tttgaaaatgccgatttgtctgaaccaaccatgagagccatcaaagaaatgggatttact
aaaatgacaaaagttcaagctaaaacgataccaccattattggctggtagagatgtttta
ggagcagcaaaaactggatctggtaaaacattggcatttttgattcctgcaattgaatta
ttatattccttgaaaatcaaaccaagaaatggtactgcagtgataataattaccccaact
agagaattagctttacaaatttttggtgttgctcgtgaattaatgcaattccattctcaa
acttgtggcatagttattggaggggccgatagaagacaagaagccacaaaattgtcgaaa
ggtgtcaacttattagtggctactccaggtagattattggatcatttgaaaaatacccaa
tttgtgtttagtaatctaaaagccttggtaattgatgaagccgatagaattttagaaatt
gggtttgaagatgaaatgaaacaaatcatcaaagttttacctaatgaaaacagacaatca
atgttgttttctgccacccaaaccacaaaagtggaagatttagcgagaatctcattaaga
ccaggtccgttatacataaatgttgtgcccgaaaaagatgtatcaactgctgatgggtta
gaacaagggtatgttgtctgtgattctgacaagagatttttattattattttctttctta
aaaagaaacgtcaagaaaaaaatcattgtgtttttgtcatcctgtaatagtgtcaaattt
tacagtgaattattgaattatattgacttaccagtattggatttacatggtaaacaaaag
caacaaaagcgtacaaacacatttttcgaattttgcaatgctaaacaaggaatattagta
tgcacagatgttgctgctagagggttggatattcctgcagttgactggattgttcaattt
gatccaccagatgatccaagagattatattcatcgtgttggaagaacagctagaggaact
caagggaaaggtaaatcattgatgtttttgactccatcggaattgggatttttaagatac
ttgaaagctgccaaagtacctttgaatgaatacgagttccctgctaataagattgccaac
atccaatctcaattgacaaaattgatcaaaaccaattatttgttgaatcaatctgccaaa
gatgggtacagagcatatttgcaagcttatgcttcccatggattaaaaactgtgtatcaa
attgataaattggatttaaagaaagttagtgctagttttggtttagatcaagtaccaaga
gtcaacttgagtattggtggcacgaaaaccaaaaagcaaaaaaggtcataa
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