Candida dubliniensis: CD36_60550
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Entry
CD36_60550 CDS
T01140
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4, putative
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cdu
Candida dubliniensis
Pathway
cdu03022
Basal transcription factors
cdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CD36_60550
09124 Replication and repair
03420 Nucleotide excision repair
CD36_60550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdu03021
]
CD36_60550
03400 DNA repair and recombination proteins [BR:
cdu03400
]
CD36_60550
Transcription machinery [BR:
cdu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CD36_60550
DNA repair and recombination proteins [BR:
cdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CD36_60550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
DUF4776
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
8048739
NCBI-ProteinID:
XP_002420857
UniProt:
B9WIE5
LinkDB
All DBs
Position
6:complement(126753..127844)
Genome browser
AA seq
363 aa
AA seq
DB search
MEAISDRLFNENAGAIESGIDDPSLLTIILDLSMKGWYNIKEMISIQDITKSLLVFLNGH
LSLNNSNQVAFLVSSSMGSKFLYPDLTTIGNPNVNEHSEHFPGMYRSFKMADQSVLRQLN
EYIKEIVKFETRNEKRGFNCLTGAISMALTYTNRMLTLDQSITTTTAAAMTTSTLESTSN
NNSTSGTGGSSGTSSSTSMKSRILIVSANDDDDLRYIPLMNCIFAAQKMKVSIDVAKLGH
NNSSYLQQASDATKGVYLHIEDPKGIIQVLSTAFFIEPNLRPYIILPTNSNVNYRASCFI
TGKSVDLGYVCSVCLCIMSQLPQSGKCPACDSEFDKKIIQELNREPQVISKKKRKLENGT
SAK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatctgatagattatttaatgaaaatgcaggggcaatagaatcagggatt
gatgacccatcattattgactataatactagacctttctatgaaaggctggtataatatc
aaagaaatgatttcaatacaagatatcaccaagtcgttgctagtgtttttgaatggacat
ttatcattaaacaatagcaatcaagtggcatttctagtgagttcttctatgggttcgaag
tttttatatcctgatctaaccacaattggaaatcctaatgtgaatgaacattcagaacat
tttcctggcatgtatcgactgtttaaaatggctgatcaatctgttttacgacaattgaac
gagtatattaaggaaattgttaaatttgagacaaggaatgagaaaagggggttcaattgt
ttgactggagcaatcagcatggccctaacgtacacaaatagaatgttgacgttggatcaa
tcaatcaccaccacgacagctgcagcaatgacaacgtctacacttgaaagtacatccaac
aataatagtaccagtggcacgggtggatcatctggtacctcatctagcacttcaatgaaa
tcaagaatcttgattgtatcggctaatgatgatgacgatcttaggtatattccattgatg
aattgtatatttgctgcacagaaaatgaaagtatctatcgacgtagcaaaattaggtcac
aacaactcatcttacttacagcaagcttctgatgccaccaagggagtttatttgcacatt
gaagatccaaagggaataattcaggtgttatcaactgcgtttttcatagaacctaaccta
cgaccatacattatcttacctacgaattcaaatgtcaattaccgagccagctgtttcatt
actgggaaatcagtggacttgggatatgtgtgttctgtttgtttatgtattatgtcacaa
ttgcctcaaagtggtaaatgtccagcttgtgattctgaatttgataaaaagatcattcaa
gaattaaatagagaacctcaggttatttcaaagaaaaaaaggaaacttgaaaatgggact
ctggctaaataa
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