Candida dubliniensis: CD36_61950
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Entry
CD36_61950 CDS
T01140
Name
(RefSeq) formamidopyrimidine-DNA glycosylase, putative
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cdu
Candida dubliniensis
Pathway
cdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CD36_61950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdu03400
]
CD36_61950
Enzymes [BR:
cdu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CD36_61950
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CD36_61950
DNA repair and recombination proteins [BR:
cdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CD36_61950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
8048828
NCBI-ProteinID:
XP_002420959
UniProt:
B9WIP7
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All DBs
Position
6:complement(394918..395964)
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AA seq
348 aa
AA seq
DB search
MHDPLLFPVLKDTNEPEKELDKMRKNLTNAVVTSVGRHGKYFWIRLHNHNTCNVLLMHFG
MTGMVKLRNVQSHLSFMENGGDKKVLEMLERFKYKDSKIEPDAEVKQEWPPRFTKFDMEL
ENNEKKLEFAFSDPRRLARVRSLSGLEVSADESLLKLSPLNVLGPDYSKPDVPPKELEKF
VFGDPDSDNHGRPRLPIDEFSSLVLSKKKPIKSLLLDQAYFAGVGNWVADEVLFQAHIHP
NEIISSKIPNDLDYIHPVLQKLYDSLIYVCEEAVRVEGDVTKFPDDWLMLHRWGKGRKEK
RKTPNGLILDHITVGGRTSCYCPALQKLLKAESTTTTATKTKRRKIKK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatccattgctattccctgttctaaaggacaccaatgaacctgaaaaagagtta
gacaaaatgaggaaaaatttaactaatgctgtcgtgacatcggtgggtcgtcatggcaag
tatttttggataagactacacaaccacaatacgtgcaatgttttgcttatgcatttcgga
atgactggaatggttaaactacgaaacgttcagtcacatttgtcatttatggaaaatggc
ggcgataaaaaggttttggaaatgctagagagatttaaatataaggacagtaaaattgag
ccggacgctgaagtcaagcaagagtggcccccaaggtttacaaagtttgatatggaattg
gaaaacaatgagaagaaactagaatttgcattttccgatccaagaagactagcgagggtt
cgatcactttctggtttggaagttagtgctgatgagagtttattaaagttgagtcctttg
aacgtcctaggtccagattacagtaagcctgatgtaccaccaaaagaattagagaaattt
gtatttggagatcctgattcagacaaccacggccgtcccagattacctattgatgagttt
agttccctcgtcttgtccaaaaagaaaccgataaagagtctcctcttggatcaggcctac
tttgctggtgtcggcaattgggtagctgatgaagttttatttcaagctcacatacatcca
aatgaaataatttcaagtaagatccctaatgacttggactatattcatcctgttctacaa
aagttgtatgattcattgatctatgtgtgtgaggaagcagttcgagttgaaggtgacgtg
actaagtttccggacgactggctaatgttgcatcgatggggcaagggcagaaaagagaaa
agaaaaaccccaaatgggcttattttagaccacataacagttggggggagaacaagttgt
tattgtccagcgttgcaaaagttattaaaagcagagtcaacaacaacaacagcaacaaaa
accaaacgaagaaaaatcaaaaaatag
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