Candida dubliniensis: CD36_73960
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Entry
CD36_73960 CDS
T01140
Name
(RefSeq) transcription elongation, nucleosome (dis)assembly factor, putative
KO
K11292
transcription elongation factor SPT6
Organism
cdu
Candida dubliniensis
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdu03021
]
CD36_73960
03036 Chromosome and associated proteins [BR:
cdu03036
]
CD36_73960
Transcription machinery [BR:
cdu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CD36_73960
Chromosome and associated proteins [BR:
cdu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CD36_73960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
SPT6_acidic
Tex_central_region
Spt6_S1
SH2
HHH_9
Tex_YqgF
TbpB_A
Motif
Other DBs
NCBI-GeneID:
8049092
NCBI-ProteinID:
XP_002421603
UniProt:
B9WJY9
LinkDB
All DBs
Position
7:1000201..1004412
Genome browser
AA seq
1403 aa
AA seq
DB search
MSEVTEERNRYEDENDEGEGDDLREPVTDSSEEEDDDDDEEEIQKVREGFIVDDDEDEVQ
TKKRKSHKKRRREKERTHHDDALDEDDLELLLENSGLKRPSSAGKFKRLKRKQVEDDEDE
NESQDHPRGEQQLRDIFSDDEEVEEEAAPRDRHIIDEFDGFIEEDDFSDEDEQTRLERRE
QRKKLKSQGPRIDTSKLSNVDRQSLSELFEVFGDGNEYDWALEAQELEDAGALDKEEPAS
LDEVFEHSELKERMLTEEDNLIRIIDVPERYQMYRSALTYIDLDNEELEMEKMWVANTLL
KEKKAFLREDWVEPFKECVGQVVQFVSKENLEVPFIWNHRRDYLEYVEPVDPAVAVPGSV
RELMLSEDDLWRIVTLDIEYHSLYEKRLNTEKIVESLEIDDDLVKDIKTLDSMVAVQDMH
DYIQFTYSKEIRQRGNEQEDGQSSNRKHSKFALFERIRENVLYDAVKAYGISAKEFGENV
QDQSSKGFEVPYRIHATDDAWESPDDMIERLIQDDEVIFRDEKTARDAVRRTFADEIFHN
PKIRHEVRSTYKSYASISVAVTEKGRATIDTHSPFADIKYAINRSPGDLIAKPDVLLRML
EAERLGLAVIKVETKDFSSWFQCIFNCLKSDGFSEISEKWNKEREIVLNLAFKRLCSMVA
LNTKEDLRRECERLIANKVRRGLLAKIEQAPYTPYGFDIGSKSNVLALTFGKGDYDSAVV
GVYIKHDGKVSRFFKSDDNPSRNRETEDAFKGQLKQFFDEDLRDETPDVIVVSGYNANTK
RLYDVVYSFVSEFGISVKSDFEDGTSQLIKVVWGQDETARLYQNSDRAKKEFPDKPTLVK
YAVSLGRYLQNPLLEYIALGDDILSLTFHEHQKLISNDLVKEVVESAFVDIVNAVGVDIN
EAVRDLRLAQTLQYVGGLGPRKASGLLRNIGSNLGSVLVNRSALVEEELTTANIFINCAS
ALNVVVGKSVNSKDFEVEILDSTRIHPEDYELARKMAADALEVDEEDMEHLGRGGVINQL
MKDDPRKLNALNLLAFAKELEERIGKKKFRTLQAIKEELINNYEEVRAPFRILNNEDAFF
ILTGERPQQLKNTIIPVTITKVNKNFNDPYAKIRGLKVVTPSLIQGTIDENVIPRDAEYV
QGQVVQAVVLELYTDNFTAVLSLRKEDIARAMKGVVVREYGKWDHKAEDADIKREKAKEN
AKLAKTRNIQHPFYRNFNYKQAEEYLAPQNVGDYVIRPSSKGPSYLTITWKVGNNLFQHL
LVEERIRGRFKEYIVDGKTYEDLDQLAFQHIQVIAKNVTDMVRHPKFREGTLSVVHEWLE
SYTRANPKSSAYVFCYDHKSPGNFLLLFKVNVNAKVVTWHVKTDVGGYMLRSSIYPNMLS
LCNGFKQAVKTQSQPKTYNTGYY
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtaactgaagaacgtaatcgatatgaggatgagaatgacgaaggagagggt
gatgatcttagagagccagtgactgattcatcggaagaagaagatgacgatgatgatgaa
gaggagattcaaaaagttcgtgaagggtttattgttgatgacgatgaagatgaagtgcaa
acgaaaaagagaaagtcccacaagaagagaaggagagagaaggagagaacacaccatgat
gatgcgttggatgaggatgatttagaattgttgttggaaaatagtggtctcaaacgtcct
agtctggcaggcaagttcaagcgattaaagagaaagcaggttgaggatgatgaggatgag
aacgagagtcaagaccacccacggggtgagcagcaattgagagatatattttcagacgat
gaagaggttgaagaggaagctgctcctcgcgatagacatataattgatgagtttgatggg
tttattgaggaagatgacttttccgatgaggatgagcaaacccgtcttgaaagacgggag
cagagaaaaaaattgaagagtcaaggtccacgaattgatacgtccaagttgtcgaatgtt
gatcgacaaagtttgctggagttgtttgaagtttttggtgatggcaacgaatatgactgg
gcattggaagcacaggagttggaggatgctggtgctcttgacaaggaagagccagcgtcg
ttggatgaagtgtttgaacattcagagttgaaggaacgtatgttgactgaagaagataat
cttatccgtataattgatgtaccagaacggtaccagatgtaccgtagtgccttgacgtac
attgatttggataatgaagagttggagatggaaaagatgtgggtggccaatactttgctc
aaagagaagaaggcgtttttaagagaagactgggtggagccatttaaggaatgcgtggga
caggttgtccagtttgtgtcgaaagagaatcttgaagttccgtttatttggaaccatcgt
cgtgattatttggagtatgttgagcctgttgatccggcggtggcggttcctgggagtgtt
agagagttgatgctttctgaggacgatttgtggagaatagttacgttggacattgagtat
cactcgctttatgagaagaggttgaatacagaaaagatagttgagtctttggaaattgat
gatgatttggttaaggatattaagactttggattcgatggtggcagttcaagatatgcat
gattatattcagtttacctattccaaggagattagacagcgtgggaatgaacaggaagac
ggccagagcctgaacagaaagcattccaagtttgctctttttgagaggattagggagaat
gttttgtatgatgcagtcaaagcatatgggatcagtgccaaggagtttggtgagaatgtg
caagaccaaagttcgaaagggtttgaggttccgtataggatccatgctacagatgacgcg
tgggagtcgcctgacgatatgattgaacggttgatccaggatgatgaggttattttcaga
gacgaaaagacggcacgagatgctgtgagaaggacgtttgctgatgagattttccacaac
ccaaagattagacacgaggtgagatctacatacaagtcgtatgcgtcgatcagtgttgct
gttactgaaaaggggcgtgctactattgacacgcacagtccgtttgctgatataaagtat
gccattaatagatcgcctggagatttgatagccaagccagatgtgttgcttagaatgtta
gaagctgaaaggttggggcttgctgtgatcaaggttgagacgaaagattttagtagttgg
tttcaatgtattttcaactgtttaaagtctgatgggttttcagagatttcggaaaagtgg
aacaaagaaagagaaattgttttgaacttggcatttaaaaggttgtgctcgatggtggca
ttaaacaccaaggaagatcttcgtcgtgagtgtgagaggttgattgctaataaggttaga
cgaggacttttggcaaagatagaacaggcgccatatacgccatatgggtttgatattggg
tccaagtctaatgttttggcattgacgtttggcaaaggtgattatgatagtgccgttgtt
ggggtgtatatcaagcatgatgggaaggtgtctcgatttttcaagtctgatgacaatccg
tcgaggaatagggaaactgaagatgcgttcaagggacagcttaaacagttttttgatgaa
gatcttcgtgatgagacgccggatgtgattgttgtttctgggtacaatgccaacaccaag
aggctctatgatgtggtgtacagttttgttagtgagtttgggatttctgtgaagagtgat
ttcgaagatgggactagtcagttgattaaagttgtttggggtcaagacgaaactgccaga
ttgtaccaaaattctgaccgtgctaaaaaagagtttcctgataagccgacgttggtcaag
tatgcggtatcattgggtcggtatttgcagaacccgttattggagtatattgcgttgggc
gacgatattttgagtttgacattccatgaacaccagaaattgatatctaatgacttggta
aaagaggttgttgagagtgcgtttgttgatattgttaatgcagttggtgttgatataaat
gaggcggtacgtgatttgcggttggcgcagaccttgcagtatgtgggtgggcttggtcca
cgtaaggcttcggggttgttacgaaatattggtctgaatttggggtcagttttggtgaat
cgtagtgcgttggttgaagaggagttgactacggctaatatatttatcaactgtgcgtcg
gcattgaatgttgttgttggcaagtcggtcaattctaaggattttgaagttgagatattg
gactcgacgagaatccaccctgaggattatgagttggcgcggaagatggctgctgatgcg
cttgaagtggatgaagaggatatggagcatttggggaggggtggagtgatcaaccagttg
atgaaagacgatccgcgtaagcttaatgcgttgaatttacttgcgtttgccaaggagttg
gaggagaggattggtaagaagaagtttcgtacattgcaggccattaaggaagagttgatt
aacaattatgaagaagttagagctccattcaggattttaaacaacgaggatgcgtttttt
atattgacgggtgaacggccacagcagttgaagaacaccataatccctgttaccattact
aaggtcaacaagaactttaatgatccgtatgctaagattagagggcttaaggtggttacc
ccgtcattgattcaaggtacgattgatgagaatgttattcctcgagatgcagagtacgtg
caaggccaggtggtgcaagcagtagtgcttgagttgtacactgacaacttcactgcagtg
ttgagtttgcgaaaggaagatattgcgcgtgccatgaaaggagtcgttgtacgtgagtat
gggaaatgggaccataaagcagaagatgcggacattaagagagaaaaggccaaggagaat
gccaaacttgccaaaacaagaaatatccagcacccgttctaccgtaatttcaactacaaa
caggctgaagagtacttggcgccacagaatgtgggagactatgttattcgtccgtcgtcg
aaaggaccttcgtatttgacaatcacatggaaagtaggcaacaatttgttccagcacttg
cttgttgaggagaggatacgtgggaggtttaaagagtatattgttgatggcaagacgtat
gaggatttagaccagttggcattccaacacatccaggttattgccaagaatgttacagat
atggttcgtcatcctaagtttagagaagggacgttgagtgttgttcatgaatggttagag
tcgtatacgcgggccaaccccaagagctcggcgtatgtattttgttatgaccataagctg
cccggtaactttttgttattgttcaaggtgaatgtaaatgccaaggtagttacgtggcat
gtcaagacggatgtgggagggtacatgctaaggtcgagcatataccccaacatgttgagt
ttgtgcaatgggtttaaacaggcggtcaagacgcagctgcagccaaaaacatataacacg
gggtattattaa
DBGET
integrated database retrieval system
