Candida dubliniensis: CD36_81480
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Entry
CD36_81480 CDS
T01140
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cdu
Candida dubliniensis
Pathway
cdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CD36_81480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdu03041
]
CD36_81480
03009 Ribosome biogenesis [BR:
cdu03009
]
CD36_81480
Enzymes [BR:
cdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CD36_81480
Spliceosome [BR:
cdu03041
]
Complex A
U2 snRNP components
U2 related factors
CD36_81480
Complex B
CD36_81480
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CD36_81480
Ribosome biogenesis [BR:
cdu03009
]
Eukaryotic type
90S particles
Helicases
CD36_81480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
8047035
NCBI-ProteinID:
XP_002419093
UniProt:
B9WDC6
LinkDB
All DBs
Position
3:354848..357151
Genome browser
AA seq
767 aa
AA seq
DB search
MANEEKRSNKRQKLIDNYEAEKIAEASEESLKAHPHASDKIELIHHDQGEFKGLTRHQTT
AEQAQKLENGPKNPFTGHDFTTKYFDILKTRRDLPVHAQRAEFLKIFHSTQIMVFVGETG
SGKTTQIPQFVLYDEMPHLTGKQVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFE
NNSGPKTILKYMTDGMLLREAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRP
DLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHA
TESEGDILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQRIFEP
APINPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPIS
KASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDL
VHFDFMDPPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAYS
CSEEILTIVAMLSVPNVFVRPASARKRADEAKLAFAQADGDHLTLINVYEAFISPEASEI
GTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVPEFEYWENVKKALVAG
FFMQVAKKKSGNKGYLTVKDNQDVLIHPSTVLSKEGEWLIYNEFVLTSKNYIRTVTVVKP
EWLVEIAPKYYNLDHFAKGDVKLSLERVVERVGNMKKLDKKKKKSKN
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaggagaaaagatcaaacaaaagacagaagttaattgacaactatgaggct
gagaaaattgctgaggcatcagaagaatctcttaaagcccatcctcatgcatcggacaag
attgaactaatccaccatgatcaaggagaattcaaagggttaactcgtcaccaaactact
gccgagcaagcacaaaagttagaaaatggaccgaagaatccctttactggtcatgatttc
accacaaagtactttgatatattgaaaacaagacgtgatttacccgtacatgctcaacga
gcagaatttttgaaaatcttccattcgactcaaataatggtgtttgttggggagacaggg
tcaggtaaaactacacaaattcctcaatttgtattgtacgatgaaatgcctcatttgact
ggtaaacaagttgcttgtacccaacccagaagagttgccgccatgtcagtggctgcaaga
gttgctgatgaaatggacgttgaattgggtgaagaagttggttacaacattcgttttgaa
aacaacagtggtcctaaaaccattttaaaatatatgactgatggtatgttattgagagaa
gccatggaagatcatgatttgacaagatattcttgtattatattggatgaagcccatgaa
cgtacattggccacagatattttgatgggattattgaaacaagtcagtgtaagaagacct
gatttgaaaatcatcattatgtctgctactttagatgcagagaaattccaaaactatttc
aataatgctcctttgttggctgtgcctggtagaacccatccagtagaaatttattacaca
ccagagtttcaacgtgactatttggatgcagctattaggaccgtgttgcaaatccatgcc
actgaaagtgaaggggatatattgttgtttttaactggtgaagaggaaattgaagatgca
tgtaggaagatctcccttgaaggtgatgaattagtcagagaacaaaattgtggtcccctt
aaggtttatcctttatatggttcattgccaccccatcagcagcaaagaatttttgaacca
gcaccgataaatcctaatccaaatggtagaccaggtcgtaaagtcattatatcaacaaat
attgctgaaacttctttgactatagatgggatagtgtatgtggttgatcctggattctca
aagcaaaaagtctacaatccaagagtaagagttgaatcacttttggtgtctcctatatcc
aaagcttctgcccaacaaagagctggtagagctggtcgtactaggcccggtaagtgtttc
cgattgtataccgaggaagcttttaaaaaggagttaattgaacaatcatatccagaaatc
ttgcgttccaaccttagttcaacagttttagaattgaaaaagttgggtattgatgattta
gttcattttgactttatggaccctccagcaccagaaactatgatgagagctttggaagaa
ttaaattatttgcaatgtttatctgacgaaggagatttaaccgccttgggtagattagca
tcacaattcccattggatcctatgcttgcagtaatgttgattggatctccagcatattca
tgttctgaagaaatcttaaccattgttgccatgttgagtgtccccaatgtatttgtgcgt
ccagcactggcaagaaagagagcagacgaagccaaattggcttttgcccaagccgatggt
gatcatttaactttgatcaatgtttatgaagctttcatatctcctgaggctagtgaaata
ggaactcacaaatggtgtcgtgataatttcctttcctatagatctttaacttcagctaaa
aatgtgagaaatcaattacaaagactcatgcaaaaatatgatttacaattaatctcacaa
tataatcaagtccctgaatttgagtattgggaaaatgttaaaaaggcattagttgctgga
tttttcatgcaagttgctaagaaaaagctgggtaataaaggatatcttactgtaaaggat
aatcaagatgttttgattcatccttccactgtactttctaaagaaggtgagtggttgatt
tataatgagtttgttttaacatccaagaattacataagaactgttaccgtggttaaacca
gaatggttagtggaaatagcacctaaatattacaacttggaccatttcgccaagggagac
gtcaagttaagtctagaaagagttgtcgaaagagttggtaatatgaagaagttggataag
aagaagaaaaaaagtaaaaattga
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