Candida dubliniensis: CD36_81990
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Entry
CD36_81990 CDS
T01140
Name
(RefSeq) DNA repair protein Rad50 homologue, putative
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cdu
Candida dubliniensis
Pathway
cdu03440
Homologous recombination
cdu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CD36_81990
03450 Non-homologous end-joining
CD36_81990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdu03032
]
CD36_81990
03400 DNA repair and recombination proteins [BR:
cdu03400
]
CD36_81990
DNA replication proteins [BR:
cdu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
CD36_81990
DNA repair and recombination proteins [BR:
cdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
CD36_81990
BRCA1-C complex
CD36_81990
NHEJ (non-homologous end-joining)
MRX complex
CD36_81990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SbcC_Walker_B
SMC_N
AAA_21
Apc5_N
DUF5955
AAA_22
AAA_29
HsbA
Motif
Other DBs
NCBI-GeneID:
8047080
NCBI-ProteinID:
XP_002419138
UniProt:
B9WDH1
LinkDB
All DBs
Position
3:480170..484093
Genome browser
AA seq
1307 aa
AA seq
DB search
MSSIYKLSIKGIRAFHPESDETIQFGFPLTLICGQNGCGKTTVIECLKYATTGTLPPNSK
GGAFVHDPSLSSRTVVTGQIKLAFKNVNGKSMITTRSVQASSKSTKSATGATVTFKTLEG
QLAIIEKGDKISVSSKNAELDSQIPVYLGASPAILENVIFCHQDESLWPLSEPSALKKKF
DDIFEASKFTKVLDNFKSIKKDMATDIKLIEQSVNHLKIDKERAKKVQDKLHNMNESVEK
YTEEITDLNIQIEKKEKQAEELFATNQEFQRTLSDYENLLTKKQALEEQIERIEASIEIL
PDNDAELMNRQENFSAMTTEKSHKIDDLQLQSTKLSDKLKNKTKQYNELIRLDGSFKAKK
AEYDLNWEKLSDLVDKNAKVFNLQTGNDRVRNIAMFQTELNKRHNTLLNEQKSLLVDNKR
KESERQSALQDVLNSISREEQHQEYATSVINTNNEKLSVLRRKVEVGSNNEVELEEKRND
LDLTMKLLQEKKDLNEVRKLDAKISECNTEISKFEFELDELAKKLSTSNKQSDLRSKVLF
LEESAKSKKAELSKIFANIDNNYFEVLGSKLDVDVGESLLSQKISNLEIKSEEQQKKVVT
LESELQINKNSIDSILKTIEENNSKIDSLKVSITKVISEDEINDYENVVNDLEDSYRNVS
EDVNSAEVTRDFKNSAISFAEENKCCLLCKRLFEQGGLGAFIQDLKQSVDEHKIQEIREQ
SLEIKKELEDVKSINLEVVNYRECLANVQNYECTLKELVDKSNQIEKELEQQRKDQQAIK
HSIDNASSLKKPLSDATRINLEVSDIEFQLDELNEDLRGFGGSVVSVDELQRQQQEINMK
IKKTRQNLNDYTESKYKAQRELQKLENRVKDTKLQISNLERSLAEVTGIKNNISEAEDIV
RDSEEKLKKIKSSLDALHVDKQMKLDALKDTQNSIRDVEQEMQRKVESSHELLTSFTSLN
DAVTYFDTNIAEKYEANALEMKELSQQCASLETKIDEYAQEIKLLEKEVMDASRIEHNIL
ANIDYRSQLSRLEETELQLGSMDIEDAQSRKEEYQVESKKLRDALSSLTAEHAGKIGEVK
QIKDQISSLKKELETEYKNVNQSYHEEWIKLQTNLLVSNDIQIYSKALDNGIMKYHSMKM
EEINRILNELWSQTYKGSDISTIAIKSDVNLQAKGNRSYNYRVVMVKESSELDMRGRCSA
GQKVLASILIRLALAECFGANCGMIALDEPTTNLDAENAEALAAALNRIIEYRKSQSNFQ
LIVITHDEKFLTHIQGDRFTDHFYRIQRDESSKSRIYSLPIGRIQEN
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtatctataagttgtctataaaagggatacgtgcatttcacccggaatctgac
gagacaattcaatttgggtttccattgacattgatttgtggtcaaaacgggtgtggtaaa
acaactgttattgaatgtttgaaatatgcaacgacagggacattgcctccaaattcaaaa
ggaggagcatttgtgcacgatccaagcttaagctctagaactgttgtaactggacaaatt
aaattggcattcaaaaacgtgaatggtaaatcaatgattactactagatcagttcaagcg
agtctgaagtcaactaaaagtgccactggagccactgtcacatttaaaactttggaaggt
caattggcaattattgaaaaaggcgataagataagtgtctcttccaagaatgctgaatta
gattcccagattccagtgtacttgggtgcatcacctgcgatcttagagaatgttattttc
tgtcatcaagatgaaagtttatggccattgagtgaaccttcggcattgaagaagaagttt
gatgatatttttgaagcttccaagtttactaaagttttggataatttcaaaagtataaaa
aaggatatggcaacagacatcaagttgatagagcaaagtgtcaaccatttgaaaatcgat
aaagagagagcaaagaaagttcaagataaattacataacatgaatgagtctgttgaaaaa
tacaccgaggaaattaccgaccttaatattcagattgagaaaaaagaaaagcaagccgaa
gaattatttgccacaaaccaagaattccaaagaactctaagtgactatgaaaatttgtta
accaagaagcaggcattggaagagcaaattgaacggatagaagcttcgattgaaatttta
cctgacaatgacgcagagcttatgaataggcaagaaaacttctctgcaatgacaacagaa
aagagtcacaagattgacgatctccagttacaaagtaccaaattgctggataaactaaag
aataaaactaaacagtacaatgaattaataagattggatggttcattcaaagccaagaag
gcggaatatgatttgaattgggaaaaattgtctgatttagttgataaaaatgcaaaagtt
ttcaatttgcaaactggcaatgacagagtacgaaatattgccatgttccaaactgagttg
aacaaaagacacaataccttgcttaacgaacaaaagagtcttttggtagataataagaga
aaagaatcagaaaggcaaagtgcacttcaagatgttcttaactcgatatcaagggaagaa
caacaccaagaatatgcaaccagtgtaataaacactaacaacgaaaagcttctggtttta
agaagaaaagtagaagtggggagtaataatgaagtagagttggaggaaaaaagaaatgat
cttgatctcacgatgaaattgttgcaagagaaaaaggatttgaatgaagtcagaaaactc
gatgcaaaaattctggagtgtaatactgaaatatcaaaatttgaatttgaactcgacgaa
cttgccaaaaagttgtccacgagcaataagcaatcggatttaagatcaaaagttttgttt
ttggaagaatctgctaaatctaaaaaggcagaattatcaaagatttttgccaatatagac
aacaattattttgaggttttgggttcaaaattagatgttgatgtaggtgagtcactttta
tcgcaaaaaatttcgaatttggaaatcaaatcagaagaacaacaaaagaaagtagtgacc
ttggaaagtgaattgcaaattaacaaaaactcaattgactctattttgaaaaccatagag
gaaaacaacctgaaaattgattcattgaaagtaagcataaccaaggttattagtgaagat
gaaattaatgactatgagaatgtagtaaatgacttggaagatagttatagaaatgtcctg
gaggatgtgaacagtgctgaagtaacacgagacttcaagaactcggccatatcgtttgca
gaggagaacaagtgttgcttgctttgtaagagattgtttgaacaaggagggcttggcgca
tttattcaggatttgaagcaaagtgttgatgaacacaaaatacaagaaatacgcgaacaa
tcattagaaataaagaaagaacttgaggatgtgaaatcaattaacttggaagtggttaac
tatagagaatgtcttgccaatgttcagaattatgaatgtacattaaaggagttggttgat
aaatcgaaccaaatagaaaaggaattagaacaacaaagaaaagatcaacaagcaattaaa
cactctattgataatgcttcactgttgaaaaaacccttatctgatgcaactagaataaat
ttggaagtactggatattgaatttcagcttgatgaattgaacgaagacttacgtgggttt
ggaggcctggtagtttcagtagatgaattgcaaaggcagcaacaggaaataaacatgaag
atcaaaaagacaagacaaaatttaaatgattatacagaaagcaaatacaaggcacaacgg
gagttacagaagctagaaaatagagttaaagatacaaaattgcagatcagtaatttagaa
agatcccttgctgaagtaacaggcatcaaaaataatatatcagaggctgaagatatagtc
cgcgactctgaagaaaagttgaaaaaaattaaaagctctttagatgcattacacgttgac
aaacaaatgaaactagatgcattaaaagatactcaaaacagtattcgtgacgttgaacaa
gaaatgcaaagaaaagtggaactgagtcacgaattgcttacatcattcacatcactcaac
gatgcagtaacttattttgacacaaacatagctgagaaatatgaagcaaatgccctagaa
atgaaagaactttctcaacagtgcgcttctttagaaaccaaaatagatgaatacgcacaa
gaaattaagctattggagaaggaagtaatggatgcatctcggatagagcacaatattctt
gccaacattgattatcgaagtcaattaagtagattagaggagacagagttacagcttgga
tccatggacatagaggacgctcaatctcgcaaagaagaatatcaagtagaatctaaaaaa
ttgcgagacgcgttgtcgtcattaactgctgaacatgctggtaagatcggagaagtgaaa
caaattaaagatcaaatatcaagtttgaagaaagagttggaaaccgaatataagaatgta
aatcaatcatatcatgaggaatggatcaagcttcaaaccaacttattggtttcaaacgac
attcagatttactcaaaggctttagacaacggtatcatgaaataccacagtatgaagatg
gaagaaatcaatcggattttaaatgaattgtggtcgcaaacgtataagggatcagatatt
tctacaattgcaattaaaagtgatgtcaatttgcaagctaaaggaaatagatcatataat
tacagagtggtgatggtaaaggaatccagtgaattggatatgagaggtagatgctcagct
ggtcaaaaagtattagccagtattttgattcggttggcgttagcggaatgttttggtgca
aattgtgggatgattgcgttagatgagcctaccaccaacttggatgcagaaaatgccgag
gcacttgctgcagccttgaacaggatcattgaataccgaaaatcgcaatcaaactttcag
ttgattgtcatcacacatgatgagaagtttttgacacacatacagggagataggtttact
gatcatttctaccggattcaaagagatgaaagtagtaaatcaagaatttatagtttacct
ataggtaggattcaagagaactaa
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integrated database retrieval system
