Candida dubliniensis: CD36_84550
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Entry
CD36_84550 CDS
T01140
Name
(RefSeq) RNA-binding RNA annealing protein, putative
KO
K12881
THO complex subunit 4
Organism
cdu
Candida dubliniensis
Pathway
cdu03013
Nucleocytoplasmic transport
cdu03015
mRNA surveillance pathway
cdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CD36_84550
09122 Translation
03013 Nucleocytoplasmic transport
CD36_84550
03015 mRNA surveillance pathway
CD36_84550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_84550
03041 Spliceosome [BR:
cdu03041
]
CD36_84550
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CD36_84550
TREX complex
CD36_84550
Spliceosome [BR:
cdu03041
]
Complex C
Other components
EJC/TREX
CD36_84550
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CD36_84550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
RRM_PARP14_3
Na_H_antiport_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
8047194
NCBI-ProteinID:
XP_002419368
UniProt:
B9WE51
LinkDB
All DBs
Position
3:join(1022022..1022300,1023242..1023655)
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AA seq
230 aa
AA seq
DB search
MSASLDKSLDDIISSNKKTFKSKRPGAKFGAKGGNRVGKKIGGTNNKKPIAKFNRPAAAA
AAAVAAVPTIDLSYATKVNVSGLPKDLKHDNIKEFFQSQIGGVQTVALTYNEKGQFKGFA
TIIFKSSKFATAAVDKYNGASIDGGAAKLRLELIIDTSKKPLAARIAPNAKAITAAKTAG
GKKIAAAKNALNKKKAGPGNKNNNNKQKKPKQKKKTIEELDQEMADYFEN
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcattagataaatcattagatgatatcatttcttcaaataagaaaactttt
aaatccaaaagaccaggtgctaaatttggcgctaaaggtggcaaccgagttggtaagaaa
attggtggtactaataacaaaaagccaatagccaaatttaacagacccgctgctgctgct
gctgctgctgttgctgctgttcctactattgatttgagttatgctactaaggtcaatgtt
tctggtttacccaaggacttgaaacacgataacattaaggaattttttcaatcacaaatt
ggtggtgtgcaaactgtggccttgacttataatgaaaaaggtcaatttaaaggttttgct
actattattttcaaatcaagtaaatttgcaactgctgctgttgataaatacaatggtgct
tctattgatggaggtgctgccaagttaagattagaattgattattgatactagtaagaaa
ccattggctgccagaattgctccaaatgcaaaggctattactgctgccaaaactgctggt
ggtaagaagattgctgctgctaagaatgctcttaacaagaagaaggctggtcctggcaac
aaaaacaacaataataaacaaaagaagccaaaacagaaaaagaagactattgaagaatta
gaccaagaaatggcagattattttgaaaattag
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