Candida dubliniensis: CD36_86030
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Entry
CD36_86030 CDS
T01140
Name
(RefSeq) ATP-dependent DEAD-box RNA helicase, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cdu
Candida dubliniensis
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_86030
03041 Spliceosome [BR:
cdu03041
]
CD36_86030
03036 Chromosome and associated proteins [BR:
cdu03036
]
CD36_86030
Enzymes [BR:
cdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CD36_86030
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CD36_86030
mRNA cycle factors
Common to processing body (P body) and stress granule
CD36_86030
Spliceosome [BR:
cdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CD36_86030
Chromosome and associated proteins [BR:
cdu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CD36_86030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7090
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
8047160
NCBI-ProteinID:
XP_002419507
UniProt:
B9WEJ0
LinkDB
All DBs
Position
3:complement(1431788..1433791)
Genome browser
AA seq
667 aa
AA seq
DB search
MSDINKQMNNLSVNNGANTVNNNNNNGLRGGRSQYVPPHLRNRQGGGNQSGSSSESSDVP
FGGSQRGGFNSNGFNSRGGFNNGGYNNNRGGYNNGGFNNRGNFNQSFGGRGGRGGFNNGG
GRYQRPTPGVGKWIDGKHEPAPRNEKLELELFGTVDDSHFQSSGINFDNYDDIPVEATGD
NVPEAITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGG
FLFPVLSESYMKGPAPVPESNGAFSSHKVYPTTLVMAPTRELVSQIYEESKKFSYRSWVR
ACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG
FEPQIRYIVDECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENIT
QKILYVEDDEKKSVILDLLSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQ
YEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGN
VGIATAFFNRNNKNIVKGLVELLSEANQEVPDFLTKVAREGAFGKMGRGGRGGSSRGPSR
DFRRSGNSGWGNSGNSGWGNSGNSGWGGNSSFSNTNSNGGGYHSNNQRSNFNSSGSYGNQ
TGANSWW
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatattaataaacaaatgaataatttgagtgttaacaatggtgctaacacagta
aataacaacaacaacaacggtttaagaggcggtcgttcccaatatgtcccacctcattta
agaaacagacaaggtggtggtaatcaatcaggttcctcatcagaatcatcagatgttcca
tttggaggttctcaacgtggtggattcaactcaaatggtttcaacagcagaggtggattc
aacaatggtggctacaacaacaataggggtggctacaacaatggtggtttcaataacaga
ggcaacttcaatcaatcttttggtggcagaggcggtagaggtggttttaacaatggtggt
ggtagataccaaagaccaactccaggtgtcggtaaatggattgacggtaagcacgaacca
gctcctcgtaatgaaaaattagaattggaattatttggtactgttgatgattctcatttc
caatcctctggtatcaactttgataattacgatgatatcccggttgaagctaccggtgac
aatgttccagaagctattacttccttcactgcgccaccattggacgaattgttggttgaa
aatattcagttgtctagattcactaaaccaaccccagttcaaaagtattccgttccaatt
gttgcagctggtagagatttgatggcttgtgcccaaaccgggtccggtaagaccggtggg
ttccttttcccagttttatctgaatcttacatgaagggaccagctccagttcctgaatca
aacggtgccttttcatcgcataaagtttacccaaccactcttgttatggcaccaactaga
gaattagtttcccaaatttatgaagaaagtaaaaaatttagttacagatcatgggttcgt
gcttgtgtcgtttatggtggtgccgatattggccaacagatgagaaacatggacagaggt
tgcgacttgttagttgccacaccaggtcgtcttaaggatttattggatagaggcaaagtt
tctttagccaatattagatacttggttttggatgaagctgatagaatgttagatatgggg
tttgaaccacaaattagatacattgtcgatgagtgtgacatgcctgctgtcaaggataga
caaactttgatgttttctgctactttcccaagagacattcaaatgttggcccgtgatttc
ttaaaagattatattttcctttctgtcggtagagttggttctacttcagaaaatatcacc
cagaaaatcttgtacgttgaagatgatgaaaagaagtcagttatcttggacttgttatca
gccaatgaaaatggattaactattgttttcaccgaaaccaagagaatggccgacaacttg
gccgactacttgtacgatcaagggttcccagctactgctattcacggtgacagatctcaa
tacgaaagagaaaaagctcttgctgcattcaagaatggtgctgctcctattttggttgcc
actgccgttgctgccagaggtttggatatccctaatgtttcccatgttatcaactatgat
ttacctagtgatatcgatgactatgttcatagaattggtcgtactggtcgtgccggtaac
gttggtattgccactgcctttttcaacagaaacaacaagaatattgtcaaaggtttagtt
gaattattatctgaagccaatcaagaagtcccagactttttaactaaagttgccagagaa
ggagcttttggtaagatgggtcgtggcggtcgtggcggttcaagccgtggtccatctaga
gatttcagaagaagtggaaattccggatggggcaactctggtaacagtggctggggtaac
tccggtaacagtggttggggtggtaattcatctttttccaacactaacagcaatggtggc
ggataccatagcaataaccaacgctctaactttaacagcagtggcagttacggtaatcaa
actggtgccaactcctggtggtaa
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