Corynebacterium durum: CDUR_01550
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Entry
CDUR_01550 CDS
T09347
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cdur
Corynebacterium durum
Pathway
cdur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDUR_01550 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdur03000
]
CDUR_01550 (alkA)
03400 DNA repair and recombination proteins [BR:
cdur03400
]
CDUR_01550 (alkA)
Enzymes [BR:
cdur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CDUR_01550 (alkA)
Transcription factors [BR:
cdur03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CDUR_01550 (alkA)
DNA repair and recombination proteins [BR:
cdur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDUR_01550 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WJY84070
LinkDB
All DBs
Position
complement(344596..345492)
Genome browser
AA seq
298 aa
AA seq
DB search
MLTRHRIPVQEPYDAPGIFTFLADRVIDGVEHADLDQLRYARTIHLPHGPGAVEVTYTQG
ALETTLELADTTDAPAAIGRVQRLFDAHRDPGDVDTHLKSDPLLAPSVRATPGIRVPGAA
NYEEMLVRALVGQQISVAAARKHLSRLAEAAGAPYESEIAGLNRCFPTPEQIISAVGDPE
SLEPTRPLRLPRQSVKAVVASMRALLDGELNVHTDADPEELFTQLVARPRIGIWTANYVL
MRLLGHPDVWPEGDVALVAGARKLGIVEGKQHKILARKAMDWAPWRSYAAMHIWRNAS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgctgacccggcaccgcatccctgtccaggagccctacgatgcgccggggattttcacg
ttcctcgccgaccgtgtgatcgacggagtggagcacgccgacctggatcagctgcgctac
gcccgaaccatacatctgccccacggccccggcgcggtagaggtgacctatacgcagggg
gcgctggagaccacgttggaactcgcagacactacggatgctcctgcggcgatagggcgt
gtccagcggttgtttgatgcgcaccgggatccgggggacgtcgatacgcacctgaaatcg
gatcccttgcttgcgccgagtgtgcgtgcgacgccggggattcgggttcctggggccgcg
aactatgaggaaatgctggttcgcgcgttggtggggcagcagatttcggtggcggctgcg
cgcaagcatttgtcccggttagctgaggcggcgggcgcgccgtatgagtcggaaattgcg
gggttaaacaggtgctttcccacgcctgagcagatcatttccgcggtgggcgacccggaa
tccctggagccgacgcgtcctttgcggctgccacggcaatccgtcaaggcggtggtagcg
tccatgcgggcactgctggacggggagctgaatgttcatacagacgcggaccccgaggag
ttgtttacgcagctggtggcccgcccgcggatcgggatatggacagcgaattatgtgttg
atgcgtttgttggggcatcccgatgtgtggccggagggcgacgtggccttggttgcgggc
gcgcgaaaacttgggatagtggagggcaagcaacataagattttggctcgcaaagccatg
gactgggcaccgtggcgttcgtacgctgccatgcatatttggaggaacgcatcatga
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