Corynebacterium durum: CDUR_01940
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Entry
CDUR_01940 CDS
T09347
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cdur
Corynebacterium durum
Pathway
cdur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDUR_01940 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdur03021
]
CDUR_01940 (rpoC)
03400 DNA repair and recombination proteins [BR:
cdur03400
]
CDUR_01940 (rpoC)
Enzymes [BR:
cdur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDUR_01940 (rpoC)
Transcription machinery [BR:
cdur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDUR_01940 (rpoC)
DNA repair and recombination proteins [BR:
cdur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDUR_01940 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
5_nucleotid
Motif
Other DBs
NCBI-ProteinID:
WJY84144
LinkDB
All DBs
Position
426010..430014
Genome browser
AA seq
1334 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDLTTLEAEMLLEKKDVEADSESELAERAQKLEED
LAELEAAGAKADARRKVQNAADKEMQHIRERAQREIDRLDEIWNTFVKLAPKQMIVDETI
YSELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELRTIINEGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENQYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTLEKGPEEFGGQ
GAYKPATNEQPAQGVYLSVAEAIMAFDRGVLGLQAPIKVRISHLRPPADIEAEHFPDGWH
KGDTWLADTTLGRIMFNELLPWNYPYLEGVMVRKGGGSDKIMLGDVITDLSARYPMITVA
QTMDKMKDAGFYWATRSGVTISMSDVLVLPDKEKILDRYEADARDIENKYWVKGALTSRE
RYDRLVELWKSATDHVGKLVEELYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVKVPVSVPVKDASGETVGYSRHSLVETSVLGRVLAADATDADGNVVLPAGTDI
GELQLDALVDAGIPGVKVRSVLTCQTPTGVCAKCYGKSMASGKQVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNKAPIASVSGTVHLSDEGNFYTM
TISPDDGSDDVVYEKLSKRQGLAMIKVPMETNPGAFIERTIQEGDHVNVGDRLLRGPADP
HDVLDILGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPG
TLVDLSEAKLANAEAIQGGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDKLIGLKENVIIGKLIPAGTGIARYRNISVKPTEAARNAAYSIPTYGDSIYGDDGF
GDYTGASVPLDGAY
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgacgagctccgcatcggactcgccaccgccgacgacatt
cgtcgctggtccaagggcgaggttaaaaagccggagaccatcaactaccgaaccctgaag
cccgaaaaggacggcctcttctgcgagcgtattttcggccccacccgcgactgggaatgc
gcctgtggcaaatacaagcgcgtccgttacaagggcatcatttgtgagcgctgtggtgtg
gaagtcaccaagtccaaggtgcgccgcgagcgtatgggccacattgagctcgctgcaccc
gtgacccacatctggtacttcaagggtgtgccttcccgcctgggctacctgctggacctg
gcaccgaaggacctggaacgcatcatctacttcgctgcgaacatcatcaccagcgttgat
gaggaagcacgccacaacgacctgaccactctagaagccgaaatgctgctggagaagaag
gacgtggaggctgactccgaatccgagctggccgagcgcgctcagaagctggaagaagac
cttgccgagctggaggcagccggtgccaaggccgacgcccgccgcaaggtgcaaaacgca
gctgacaaggaaatgcagcacatccgcgagcgcgcccagcgcgaaatcgatcgcctggat
gaaatctggaacacctttgtcaagcttgccccgaagcagatgatcgttgatgagaccatc
tactccgagctggtggaccgctacgaagactacttcaccggcggcatgggtgccgaggca
atccagaccctgatccgcaacttcgaccttgacgccgaggccgaggagctgcgcaccatc
atcaacgaaggcaaaggccagaagaagatgcgtgccctcaagcgcttgaaggtcgttgcg
gctttccagcgttctggcaacgacccggcaggcatggttctggattgcattccggtgatc
ccgcctgagctgcgccccatggttcagcttgacggtggccgttttgccacttccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggtgcccccgagatcatcgtaaacaacgagaagcgcatgctgcaggaatccgtggacgca
ctgttcgacaacggccgtcgcggccgccccgtcaccggcccgggcaaccgcccgctgaag
tccctctctgacctgctgaagggcaagcagggtcgcttccgccagaacttgctgggtaag
cgcgtggactactctggtcgttccgtgattatcgttggtccgcagctgcgcctgcacgaa
tgtggtctgcccaagctgatggcgctggaactgttcaagccgttcgtgatgaagcgcctg
gtggaaaaccagtacgcacagaacatcaagtcggccaagcgcatggtggagcgtcagcgc
cccgaggtgtgggacgtgctggaagaagccattgcggagcacccggtgatgctgaaccgt
gcgccgacgctgcaccgcctgggtattcaggcgttcgagccggtgctggttgagggtaaa
gctatccagctgcacccgctggcttgtgaagcgttcaacgccgacttcgacggtgaccag
atggccgtgcaccttccgctgtcagcggaagcacaggctgaggcgcgtatcctgatgctg
gcctccaacaacatcctgtccccggcgtccggtaagcctctggccatgccgcgtctggac
atggtgactggtctgtacttcctcaccctggagaaggggccggaggagttcggtggacag
ggcgcctacaaacccgccaccaacgagcagcctgcacagggcgtgtacctgtctgttgcc
gaggccatcatggccttcgaccgtggtgtgctaggcctccaggcaccgatcaaggtgcgg
atttctcacctgcgtcccccggcggacattgaggctgagcacttccccgacggctggcac
aagggtgacacctggttggctgacaccacccttggtcgcatcatgttcaacgagctgctg
ccgtggaactacccgtaccttgagggtgtgatggtccgtaagggcggcggttccgacaag
atcatgctgggtgatgtgattacggatctttccgcacgctacccgatgattaccgtggcc
cagaccatggacaagatgaaggacgctggtttctactgggcaacccgctctggtgtgacc
atctccatgtccgacgtgctggtgctcccggacaaggagaagatccttgaccgctacgag
gccgacgcccgcgacattgagaacaagtactgggtcaagggtgccctgacctcgcgcgag
cgctacgaccgcctggtggaactctggaagagcgccaccgaccatgtgggtaagctcgtg
gaggaactgtacccggatgacaacccgattccgatgatcgtgaagtccggtgctgccggt
aacatgcgccagatctggaccctggccggcatgaagggcatggttgtgaactccaagggt
gactacatcacccgtccgatcaagacctccttccgcgagggcctgaccgtgttggagtac
ttcaacaactctcacggttcccgcaagggcctggccgataccgctctgcgcaccgccgac
tcgggttacctgacccgtcgtctggtggacgttgcgcaggacgtgattgtgcgcgaagag
gactgcggtacccgccagggtgtcaaggttcccgtgtccgtgcccgtcaaggatgctagt
ggcgagaccgtgggttacagccgccacagcctggtggagacctcggtactgggccgtgtg
ctcgccgccgatgcaacagacgcggacggcaacgtcgtcctcccggcaggaaccgacatt
ggtgagctgcaactcgatgcgctggtggatgccggtattcccggcgtcaaggtccgttcc
gtgctgacctgccagactccgaccggcgtgtgtgccaagtgctacggcaagtccatggca
tccggcaagcaggtggacattggcgaggccgtgggcatcgtggccgcgcagtccattggt
gagcccggtacccagctgaccatgcgcaccttccaccagggtggtgttggcggtgacatc
accggtggtcttccgcgtgtgcaggagttgttcgaggcccgcgtgccaaagaacaaagcc
ccgattgcctctgtctccggcacggttcacctgtccgacgagggcaacttctacaccatg
accatcagcccggacgatggttccgatgacgtggtgtacgagaagctgtctaagcgccag
ggcctggccatgatcaaggttcccatggaaaccaacccaggtgcgtttattgaacgcacc
attcaggaaggtgaccacgtgaacgtgggcgaccgcctgctgcgcggtccggctgacccg
catgatgttcttgacatcctgggtcgccgtggcgtggaacagcacctcatcgacgaggtt
caggccgtgtaccgcgcccagggtgtggccattcacgacaagcacatcgaaatcatcatc
cgccagatgctgcgccgcggcacagtcatcgaatccggttccaccgaattcctgcccggc
accctggttgacctctccgaggcgaagctcgccaacgctgaggcaatccaaggcggcggt
cagcccgccgagctgcgcagtgagatcatgggtatcacgaaggcatccctggctaccgag
tcgtggctatccgctgcgtccttccaggagaccacgcgtgtgcttaccgacgccgcgatc
aacaagcgctccgacaagctcatcggcctgaaggagaacgtgatcatcggtaagctcatc
ccggctggtaccggcatcgcccgctaccgcaacatctccgtcaagcccaccgaggctgct
cgcaacgccgcctactcgatcccgacctacggcgattcgatttacggtgacgatggcttt
ggcgactacaccggcgcgtccgtgccgttggatggtgcctactaa
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