KEGG   Corynebacterium durum: CDUR_03860
Entry
CDUR_03860        CDS       T09347                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cdur  Corynebacterium durum
Brite
KEGG Orthology (KO) [BR:cdur00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdur03400]
    CDUR_03860
Enzymes [BR:cdur01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDUR_03860
    5.6.2.6  RNA 3'-5' helicase
     CDUR_03860
DNA repair and recombination proteins [BR:cdur03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CDUR_03860
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr WH2_Lhr Helicase_C ResIII DUF6406 AAA_25 Cas3-like_C_2 PhoH
Other DBs
NCBI-ProteinID: WJY84523
LinkDB
Position
802685..807382
AA seq 1565 aa
MADSVLARFCPPVAEWFRGVFAAPTPVQQEAWEAISAGEHALVVAPTGSGKTLAAFLWAL
NSLVSAPGQLSLIDAPPTAASSRKGTGVRVLYVSPLKALGVDVENNLRAPLLGIGRTGER
LGQPVPEVRVGVRSGDTTSAERSRQVRQPPDILITTPESLYLMLTSKAGDILVDVDTVII
DEIHAIAGTKRGAHLALSLERLERITTTPPQRIGLSATVRPLERVAEFLGGNREVRIINP
PAEKKWALDVRVPVEDMSDLPTPEIGSTIGEAVIDDPLGLSGPSPLEESALPTQKSIWPF
VEQDVYAQIMAAHSTLLFVNARRTAERLTSRLNELWAAEHDPESLSPQRRRDPAQMMSSA
DVAGKAPVVIARAHHGSVSKDERALTEQMLKSGELKCVVATSSLELGIDMGAVDLVIQVE
SPPSVASALQRVGRAGHTVGAVSTGVLHPKNRSDLLQTAVTVERMLEGKIEELKVPSNPL
DVLVQQTIAATVTADIHVDTWYETVRRAYPYKTLDRDVFDAVIDLASGVYPSTDFAELKP
RIVFDRITGMLSARPGAQRVAVTSGGTIPDRGMFGVFLIGSEDTKAPRRVGELDEEMVHE
SRVGDIFTLGATSWRVEDITRDQVLVSPAPGHTGRLPFWNGDGLGRPAELGKAVGRFRRE
LAADPARVAAFSDNARANLVNYVQQQQEATGVVPDEKTLVLERFKDELGDWRVVLHSPYG
RGVNAAWALAIGARIAEQTGIDAQPVAGDDGIVLRLPEGESPPGTELVMFDPGDIEQIVA
EQVGNSALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAAQLLDIARKYPSFPVILET
VRECLQDVYDLPALKYLCRDLQERRVQVAEVTVEQPSPFSSSLLFNYTGAFLYEGDSPLA
EKRAAALALDPALLAKLLGTVELRELLDPDVIEQTHSELQRTLPGRQARTAEELADVLRV
IGPIPYDDLPAHCAFDEPFAALHTLGNRVMQVRIAGREHAAISTDAPLLRDALGIPVPPG
VSAPTHFVDDALEQLIHRFAKTRGPFIVSDVAEAFGLGVGTAHTIVREAARAGIVVEGRY
RQGVDTQEYCAKDVLRTIRLRSLARAREQAEPVSQHTYARFLQQWHGIAEVGQRPELQGA
DGVFAVVEQLAGVRLPASAWESWIFPTRVAGYQPTMLDELTTSGEVSIVGAGKAGARDPW
IMLLPSDYAAELAPIVDVTLTPTQQAVVDLLARGGGFYFPELLSDVGGGLVVPGTMQATE
LQDTLWELVEMGMVTPDGFGPIRARLAAGTSGKSAHRAKRRPVRGRLRRGRTSFGPVRNN
PTPPDMLGRWSLAVTPATDATHRSIAHGEAWLERYGVVTRGSVVAEDTIGGFALAYKVLA
GFEESGKATRGYLIDALGAAQFSTPAVVDRLRGIERASAPCGVVVLAAADPANPYGASLP
WPDDGARLTRGAGALVVLNDAQPIAHLTRGGRTLTLLGEDCVGLVVHALGDAIARGMTSR
ITVEKVNGDPVLESALLAEFRAAGAHITPRGVSIGGAGSTGSRGGAGASGIGGRSLGEAL
AELGD
NT seq 4698 nt   +upstreamnt  +downstreamnt
atggctgacagtgtgcttgctcgtttttgccctccagtggccgagtggtttcggggtgtt
ttcgccgccccgactccagttcagcaggaggcctgggaggctatttctgctggtgagcac
gcattggtggtcgctccgactggttcgggtaagacgctggcggcgtttttgtgggcattg
aattctctggtgtcggcaccggggcagttatcgcttatcgacgcccctcctaccgcggcg
tcgtcacgcaagggcactggtgtgcgggttctgtatgtgtcgcccttgaaggcgttgggc
gtggatgtggagaataacctgcgtgcgccgctgttgggtatcgggcgcacaggggagcgt
ttggggcagccagtgccggaggtgcgagttggtgtgcgatcgggggatacgacgagcgct
gagcgcagcaggcaggtgcgccagccgccggatattttgatcaccactccggagagcctg
tatttgatgttgacgtccaaggcgggtgacattctggtggatgtggatacggtgataatc
gatgagatccacgccattgcgggcacgaagcgcggtgctcacctggcgctgagcctggaa
cgactggaacgcatcactacaactccgccgcagcgtatcggcctgtcggcaactgtccgc
ccgttggagcgggtggcggagtttttgggcggcaaccgcgaggtacggatcattaatccg
cccgcagagaagaagtgggccttggatgtgcgggtgccagtggaggacatgtcggatctg
cccaccccagagattggctcaaccatcggggaggcggtgatcgatgatcctttggggctt
tccggcccgagtcccctggaggagtcggcgctgccaacacaaaagtctatttggccgttc
gttgagcaggacgtgtacgcgcagatcatggcagcacattcgacgctgctgttcgtcaat
gcccgccgcacggcggagcgcctgaccagcaggttgaatgagttgtgggcggcggagcat
gacccggagtcattgtcgccgcagcggcgtcgagacccggcgcagatgatgtcctcagcg
gacgtggcagggaaggccccggtggtgatcgcgcgggcgcaccacggatcagtaagcaag
gacgagcgcgcactcacggaacagatgctgaagtcgggggagctgaaatgcgtggtggcc
acctcctcgctggagctgggcattgacatgggcgcggtggacctggtgatacaggtggaa
tctccgccatcagtggccagcgccctccaacgtgtggggcgtgctggtcacacggtgggc
gcggtgtcaacaggtgtgctgcatccgaaaaaccgcagtgacctgttgcaaaccgccgta
acggtggagcgcatgctggaggggaagattgaggaactgaaagtaccctccaaccctctc
gatgtgctggtgcagcagaccatcgctgccaccgtcacagccgatattcacgtggacacc
tggtacgagacggtccgtcgcgcctacccgtataaaaccctggaccgcgacgtcttcgat
gctgtcattgacctagccagcggcgtgtacccctcaacggattttgctgagctcaaaccc
cgcatcgtgttcgaccgcatcaccggcatgctttccgcgcgcccaggcgcgcagcgggtg
gcggtgaccagcggcggaaccattcctgaccgtggcatgttcggggtgttcctcatcggc
tcggaggacacgaaagccccacgccgtgttggtgagttggacgaggagatggtgcacgaa
tcccgcgtgggcgacatcttcacgctgggggccacgagctggcgggtggaagatatcacc
cgcgaccaggtgctggtctcacccgcgccggggcatacgggccgtctgcccttctggaac
ggggacgggttgggtcgacccgccgaactgggcaaagccgtgggtaggtttcgccgcgaa
ctagctgccgacccggcgcgagtggcggctttcagcgataatgcgcgcgccaacctggtg
aattatgtgcagcagcaacaggaggccaccggggtggtcccagacgagaagaccctggtg
ctggagcgtttcaaggatgagctgggggattggcgcgtggtgctgcattccccgtatggg
cggggtgtgaatgccgcgtgggcgctggccattggcgcgcgtatcgcggagcagacgggg
attgacgcgcagcctgtcgctggtgacgatggtattgtgttgcgcctccccgagggggaa
tccccgccgggcaccgagctggtgatgttcgacccaggggatattgagcagatcgtggcg
gagcaggtgggtaattcggccttgtttgcgtcccggttccgggagtgcgccgcccgtgcg
ttgttgttgccgcgccggaatccgggcaagcgcgcgccgctctggcaacagcgtcaacgc
gcagcgcagctgttggatattgcccggaagtacccctcgtttcccgtcattttggagacg
gtgcgggaatgtcttcaggacgtgtatgaccttccagccttgaagtatctgtgtcgagac
ctgcaggaacgccgtgttcaggtggctgaggtgacggtggagcaacccagccctttttcc
tcctcgttgctgtttaattacacaggcgcgttcctgtatgagggcgacagtcccctcgcg
gagaagcgcgccgccgctttggctctggacccggcgctgttggccaagctgctaggcacg
gtggagctccgggaactgctcgacccggacgtgatcgaacaaacgcactccgagctgcag
cgaacccttcccggtcgccaggcccgcactgctgaagagcttgcggacgtactgcgggtt
atcggtccgattccctacgatgacctgcccgcgcactgtgccttcgacgagcccttcgcc
gccctgcacacccttggtaatcgcgtgatgcaggtacgtattgccgggcgggagcacgcc
gccatcagcacggatgctccgttgcttcgcgacgccctgggaatccccgtcccgcctggg
gtttcggcacccacgcatttcgtggatgacgccttggaacagctaattcatcgcttcgcc
aaaacccgtgggccgttcatcgtcagcgacgtggcagaggcttttggccttggcgtgggc
accgcgcacaccatcgtccgggaggcggcacgcgccgggattgtggtagaggggaggtat
cggcagggcgtcgatacgcaggagtattgcgcaaaggatgtgctgcggaccattcgtctg
cggagtttggcgcgggcgcgggagcaggccgagccggtgagccaacacacctacgcgcgg
ttcctgcagcagtggcacggtattgcggaggtagggcagcgccccgaactgcagggtgcc
gacggtgtgtttgctgtggtggagcagttggcgggtgtgcggctgcctgccagtgcgtgg
gaatcctggatttttccgacgcgggtggcgggctaccagcccaccatgctggacgaactc
accaccagcggcgaggtcagcatcgttggtgcgggcaaagccggggcgcgcgatccctgg
atcatgctgctgcccagcgactatgccgccgaactcgcgccgattgtggacgtcacactc
acacccactcagcaagcggtggtggatctgctggcgcgcggcggcggattctactttccc
gaactgctcagcgacgttggcggcgggctcgtcgtgccgggtacgatgcaggccaccgaa
ctacaggacacgctgtgggaactcgtggagatgggtatggtcaccccggatggcttcggg
ccgattcgtgcgcgcctcgccgcaggtacgtcaggaaagtccgcgcaccgcgcgaaacga
cgccccgtgcgcggcagacttcgccggggacgcaccagtttcggccctgtgcgcaataac
cctacgccgcccgacatgctggggcgctggtcgctggctgtcactcctgccaccgacgcc
acccaccgctccatcgcccacggtgaggcatggctggaacgctacggcgtggtcactcgt
ggcagcgtggttgccgaagacaccatcggtgggttcgccctcgcctacaaggttctcgcc
gggtttgaggaatctggcaaagccacccgcggctaccttatcgacgctctgggagccgcg
cagttttccacgcccgccgtggtggaccgcctgcgcggtatcgaacgcgcctctgcgcca
tgtggcgtggtggttctcgccgccgctgaccccgccaatccctacggtgccagcttgccg
tggcccgatgatggtgctcgtcttactcgtggtgctggggcactggttgtgcttaacgac
gcccagcctatcgcccacctcacgcgcggcggacgcaccctcactctccttggcgaggac
tgcgtggggcttgtcgtgcacgctttgggcgatgcgattgcgcggggcatgaccagcaga
atcacggtggagaaagtcaacggcgaccctgttttggagtccgccctgcttgccgaattc
cgcgccgctggagcgcacatcaccccacgcggcgtgagcatcgggggagccgggagtact
ggttcgcgtggcggtgctggagccagtggcattgggggtcggtcgctgggtgaggcattg
gctgagctgggggattag

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