KEGG   Corynebacterium durum: CDUR_05105
Entry
CDUR_05105        CDS       T09347                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
cdur  Corynebacterium durum
Pathway
cdur03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdur00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CDUR_05105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdur03021]
    CDUR_05105
   03019 Messenger RNA biogenesis [BR:cdur03019]
    CDUR_05105
Transcription machinery [BR:cdur03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CDUR_05105
Messenger RNA biogenesis [BR:cdur03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CDUR_05105
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N AAA_25 Spore_III_AA NACHT AAA_22 VWA_2
Other DBs
NCBI-ProteinID: WJY84765
LinkDB
Position
1062919..1064859
AA seq 646 aa
MTDTDITATDSTSGAQQQNLSALRLPELRQIAQRMGIRGTSTLRKGALIEAIQSNGASLA
KPARETASEAAEAVEAAGTTEPTKAPTRRRATKRVAAASDDAASSSSASDAAAAADEAST
NAPAESSNTGDGEEVRYESRSAARRARRNRARMNQREQRDKERGQQRNASGARDSRDTDD
AAPAADTSADSAGNTANTSDDNARQDGNRDNQQDRRQQRNYRDDDGDDRRGRRNNRRERP
RRGRDNRNDDEVREDDVLQNVAGILDIVDNNVAFLRTSGYQSGPADVFVTQQMIRRLGLR
RGDAIIGQVKAPREGQNNYQGGRNRQKYNPLVRVDTINGMTVEEARQRPEFSKLTPLYPN
QRLRLETDPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNVANAIAKNNPECYLM
VVLVDERPEEVTDMQRSVHGEVIASTFDRPPSEHTTVAELAIERAKRLVEQGQDVVVLLD
SITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGS
AGDTVIFEEFKGTGNAELKLDRRISERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRR
ILSNLDNQQAIDLLIKQLKKTKSNGEFLMQIASSAPMAGDVEEDFS
NT seq 1941 nt   +upstreamnt  +downstreamnt
gtgacagatacggatatcaccgccaccgattcaacgagcggtgcacagcagcagaacctc
agcgcactgcggctcccagaattacgccaaatcgcacagcgcatgggtattcggggtacc
tctacgttgcgtaaaggagccctcattgaggcgattcaatccaatggggcatcgttagca
aagcctgcgcgtgagactgcatcagaggcggcagaggccgtggaggccgccggaactact
gagcctactaaggcacccactcgacgccgcgccaccaaacgagtcgctgcggcgagtgac
gacgccgcgtcatcctcctctgcgtccgatgcagctgccgctgccgatgaggcttcaaca
aacgcacccgcagagtccagcaacacaggtgacggcgaagaggttcgctacgaatcccgg
tctgcggcacgtcgtgcacgtcgcaatcgtgcccgcatgaatcagcgcgaacagcgggat
aaggagcgcggacagcagcgcaatgcctctggcgcgcgtgattcccgcgatactgatgac
gccgcgcctgcggccgatacatctgctgactcggctggcaatactgcaaacacgagcgac
gacaatgctcgccaagacggcaaccgcgacaatcaacaggaccgccgccagcagcgcaat
taccgcgatgatgacggggatgatcgtcgtgggcgccgcaacaaccgccgtgaacggcca
cgccgtggccgggacaaccgtaatgacgatgaggtgcgggaggacgatgttctgcagaac
gttgccggcatcctggacattgtggacaacaatgtcgctttcctacgtacctctgggtac
cagtccggccccgccgatgtgtttgtgacccagcaaatgatccgccgcctggggctgcgt
cgtggtgacgccatcattggtcaggttaaggctccgcgtgaggggcagaacaactaccag
ggtggacgcaaccgtcagaagtacaacccgttagtgcgggtggacaccatcaatggcatg
accgttgaggaagcgcgccagcgtcctgagttttccaagctcaccccgttgtatccgaat
cagcgcctgcgcctggagacggacccgaagatcctgaccacgcgcgtgatcgacttgatc
atgccgattggcaaggggcagcgcgcgttgattgtttccccgccaaaggccggtaagacc
accattctgcagaacgttgccaacgctattgccaaaaacaaccctgagtgttacctcatg
gttgtgttggtcgatgagcggcccgaagaggtcactgacatgcagcgcagtgttcacggc
gaggtgatcgcttccaccttcgaccgtccgccaagtgagcacaccactgtggcggaactt
gccattgagcgcgcgaagcgccttgttgagcaggggcaagacgtggtggttctcctggat
tccatcacgcgtctgggtcgggcatacaacaacagctctccggcatcggggcgtatcctc
tctggtggtgtggattccaacgccttgtacccgcccaagcggttcctgggtgctgcccgc
aacattgaaaacggcggttcgttgacgattattgccaccgctatggtggagactggttct
gccggtgacaccgtgatcttcgaggagttcaagggcactggcaatgctgagttgaagttg
gatcgtcgtatctccgagcggcgcgtattccccgccgtggatgtgaacccgtccggtact
cgcaaggatgagttgctgctggcccccgaagaggcccgcattatgcacaagcttcgccgc
attctgtccaacttggataatcagcaagcgattgacctgctgattaagcagttgaagaag
acgaagtccaacggtgaattcctcatgcagatcgcgtcgagcgcacctatggctggtgat
gttgaggaggacttctcctaa

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