Corynebacterium durum: CDUR_05105
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Entry
CDUR_05105 CDS
T09347
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
cdur
Corynebacterium durum
Pathway
cdur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDUR_05105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdur03021
]
CDUR_05105
03019 Messenger RNA biogenesis [BR:
cdur03019
]
CDUR_05105
Transcription machinery [BR:
cdur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CDUR_05105
Messenger RNA biogenesis [BR:
cdur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDUR_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
VWA_2
Motif
Other DBs
NCBI-ProteinID:
WJY84765
LinkDB
All DBs
Position
1062919..1064859
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AA seq
646 aa
AA seq
DB search
MTDTDITATDSTSGAQQQNLSALRLPELRQIAQRMGIRGTSTLRKGALIEAIQSNGASLA
KPARETASEAAEAVEAAGTTEPTKAPTRRRATKRVAAASDDAASSSSASDAAAAADEAST
NAPAESSNTGDGEEVRYESRSAARRARRNRARMNQREQRDKERGQQRNASGARDSRDTDD
AAPAADTSADSAGNTANTSDDNARQDGNRDNQQDRRQQRNYRDDDGDDRRGRRNNRRERP
RRGRDNRNDDEVREDDVLQNVAGILDIVDNNVAFLRTSGYQSGPADVFVTQQMIRRLGLR
RGDAIIGQVKAPREGQNNYQGGRNRQKYNPLVRVDTINGMTVEEARQRPEFSKLTPLYPN
QRLRLETDPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNVANAIAKNNPECYLM
VVLVDERPEEVTDMQRSVHGEVIASTFDRPPSEHTTVAELAIERAKRLVEQGQDVVVLLD
SITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGS
AGDTVIFEEFKGTGNAELKLDRRISERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRR
ILSNLDNQQAIDLLIKQLKKTKSNGEFLMQIASSAPMAGDVEEDFS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
gtgacagatacggatatcaccgccaccgattcaacgagcggtgcacagcagcagaacctc
agcgcactgcggctcccagaattacgccaaatcgcacagcgcatgggtattcggggtacc
tctacgttgcgtaaaggagccctcattgaggcgattcaatccaatggggcatcgttagca
aagcctgcgcgtgagactgcatcagaggcggcagaggccgtggaggccgccggaactact
gagcctactaaggcacccactcgacgccgcgccaccaaacgagtcgctgcggcgagtgac
gacgccgcgtcatcctcctctgcgtccgatgcagctgccgctgccgatgaggcttcaaca
aacgcacccgcagagtccagcaacacaggtgacggcgaagaggttcgctacgaatcccgg
tctgcggcacgtcgtgcacgtcgcaatcgtgcccgcatgaatcagcgcgaacagcgggat
aaggagcgcggacagcagcgcaatgcctctggcgcgcgtgattcccgcgatactgatgac
gccgcgcctgcggccgatacatctgctgactcggctggcaatactgcaaacacgagcgac
gacaatgctcgccaagacggcaaccgcgacaatcaacaggaccgccgccagcagcgcaat
taccgcgatgatgacggggatgatcgtcgtgggcgccgcaacaaccgccgtgaacggcca
cgccgtggccgggacaaccgtaatgacgatgaggtgcgggaggacgatgttctgcagaac
gttgccggcatcctggacattgtggacaacaatgtcgctttcctacgtacctctgggtac
cagtccggccccgccgatgtgtttgtgacccagcaaatgatccgccgcctggggctgcgt
cgtggtgacgccatcattggtcaggttaaggctccgcgtgaggggcagaacaactaccag
ggtggacgcaaccgtcagaagtacaacccgttagtgcgggtggacaccatcaatggcatg
accgttgaggaagcgcgccagcgtcctgagttttccaagctcaccccgttgtatccgaat
cagcgcctgcgcctggagacggacccgaagatcctgaccacgcgcgtgatcgacttgatc
atgccgattggcaaggggcagcgcgcgttgattgtttccccgccaaaggccggtaagacc
accattctgcagaacgttgccaacgctattgccaaaaacaaccctgagtgttacctcatg
gttgtgttggtcgatgagcggcccgaagaggtcactgacatgcagcgcagtgttcacggc
gaggtgatcgcttccaccttcgaccgtccgccaagtgagcacaccactgtggcggaactt
gccattgagcgcgcgaagcgccttgttgagcaggggcaagacgtggtggttctcctggat
tccatcacgcgtctgggtcgggcatacaacaacagctctccggcatcggggcgtatcctc
tctggtggtgtggattccaacgccttgtacccgcccaagcggttcctgggtgctgcccgc
aacattgaaaacggcggttcgttgacgattattgccaccgctatggtggagactggttct
gccggtgacaccgtgatcttcgaggagttcaagggcactggcaatgctgagttgaagttg
gatcgtcgtatctccgagcggcgcgtattccccgccgtggatgtgaacccgtccggtact
cgcaaggatgagttgctgctggcccccgaagaggcccgcattatgcacaagcttcgccgc
attctgtccaacttggataatcagcaagcgattgacctgctgattaagcagttgaagaag
acgaagtccaacggtgaattcctcatgcagatcgcgtcgagcgcacctatggctggtgat
gttgaggaggacttctcctaa
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