Corynebacterium durum: CDUR_06205
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Entry
CDUR_06205 CDS
T09347
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cdur
Corynebacterium durum
Brite
KEGG Orthology (KO) [BR:
cdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdur03016
]
CDUR_06205
Enzymes [BR:
cdur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CDUR_06205
Transfer RNA biogenesis [BR:
cdur03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CDUR_06205
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WJY84978
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All DBs
Position
1296325..1296870
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AA seq
181 aa
AA seq
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MRLFAALPLPDHVRDHLVSALLPIRTAAGPALRWSDPDQWHITCAFYGEQPDGITDDLLA
HIAAGVGTPFDLCLKGAGSFHDRNLWIGVGGEVSALHTLMAACALDDAPEHHRAHMTVAR
VTRTAARPRFSPSLTGEFVHALSVYSGPTWTVDEVHLIQSELGKGRSGGPLHTVVGNIFL
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagactgtttgccgcgttgccgcttcctgaccatgtgcgcgaccatctcgtctccgca
cttcttcccattcgcactgctgcaggaccggcgctacggtggtccgaccccgatcaatgg
cacatcacctgtgcgttttacggtgagcagcccgacggtataaccgatgacctgctcgcg
cacatcgctgcgggggtggggactccctttgacctgtgtttgaaaggcgctggcagcttc
cacgaccgtaacttatggatcggcgtcggtggtgaggtttcagcgcttcacacgctgatg
gctgcatgtgcgcttgacgacgcccctgaacaccaccgcgcacacatgaccgttgcgcgc
gtcacccgtactgcagctcgtccaaggttttccccgtccctcacgggggaatttgttcat
gcgttaagcgtgtacagcggacccacatggacggtggatgaggtgcatcttatccagtcc
gaactcgggaaaggacgatccggcgggccactgcacactgttgtgggaaacatttttttg
gtgtag
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