Corynebacterium durum: CDUR_12940
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Entry
CDUR_12940 CDS
T09347
Symbol
nei2
Name
(GenBank) Endonuclease 8 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cdur
Corynebacterium durum
Pathway
cdur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDUR_12940 (nei2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdur03400
]
CDUR_12940 (nei2)
Enzymes [BR:
cdur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CDUR_12940 (nei2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDUR_12940 (nei2)
DNA repair and recombination proteins [BR:
cdur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDUR_12940 (nei2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WJY86292
LinkDB
All DBs
Position
2730049..2730864
Genome browser
AA seq
271 aa
AA seq
DB search
MPEGHVIHRLARELNRDFSEAPLHVSSPQGRFRTEAELLDAHPLAAAEAWGKHLFIDFDT
DRPEHIVHIHLGLIGKLQINPLAEPVGEVRFRMATDELAADLRGPQWCRLITDGERDAAI
DKLGGDPLREDSDPDATWMRLRRASRSIGALLMDQKLFAGVGNIYRAETLFRQGISPFTS
AKMLDRGEFDAIWSDLSELMRDGVDVGRIDTVRPEHTPETMGREPRKDDHGGEVYVYRRA
GQPCYVCGTPISETVMEGRNLFWCEGCQPSP
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggtcatgtcattcaccgccttgcccgcgagctcaaccgtgatttcagtgaa
gcaccacttcacgtcagctcgccgcaaggacgttttcgcaccgaggcagagcttctcgac
gcccacccactggcggcagcagaggcatggggcaagcacctattcatcgactttgacacc
gaccgacccgagcacatcgtgcacatccatctgggactcatcgggaaactgcagatcaac
ccgttagccgaaccggtgggagaggttcgctttcgcatggccaccgatgagcttgccgct
gatctgcgcggaccacaatggtgccgattgattacagacggcgagcgggacgcggccatc
gataagctaggcggtgacccactgcgggaggattccgacccggacgccacatggatgcgg
ctgcgcagggcgtcgcgaagcattggggcgctgttgatggaccaaaagttgtttgccgga
gtgggcaatatttaccgtgctgagacgctgttccgacagggaatatcgccgtttaccagc
gcaaaaatgctagaccgtggggagtttgacgcgatatggagcgatcttagtgaattgatg
cgtgacggggttgatgttggacggattgacaccgtacggcccgaacacacccccgaaaca
atggggagggaaccgcgcaaggatgatcacggcggcgaggtatatgtatatcggcgggca
ggccaaccatgctatgtctgcggcacacccatcagcgaaaccgtgatggagggtcgcaac
cttttctggtgcgaaggctgccaaccatcgccatag
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