Corynebacterium diphtheriae VA01: CDVA01_0137
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Entry
CDVA01_0137 CDS
T01702
Symbol
pdxS
Name
(GenBank) pyridoxine biosynthesis protein
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cdv
Corynebacterium diphtheriae VA01
Pathway
cdv00750
Vitamin B6 metabolism
cdv01100
Metabolic pathways
cdv01240
Biosynthesis of cofactors
Module
cdv_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cdv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
CDVA01_0137 (pdxS)
Enzymes [BR:
cdv01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
CDVA01_0137 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
TetR_C_27
TMP-TENI
NMO
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
AEX82406
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Position
136406..137299
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AA seq
297 aa
AA seq
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MTQETFTATTRVKRGLADMLKGGVIMDVVTPEQARIAEDAGASAVMALERVPADIRAQGG
VARMSDPDLIEGIVNAVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLSPADYVNHID
KWNFDVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVKHLRTIRGEINRLRSM
DEDQLYVAAKEIQAPYDLVREVAATGKLPVTLFVAGGVATPADAALVMQMGAEGVFVGSG
IFKSGNPAARAAAIVKATTMYDDPAAIAEVSRGLGEAMVGINVADVPAPHRLAERGW
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagaaacttttactgcaactacgcgtgtgaagcgcggcctggccgacatgctc
aagggcggtgtgatcatggacgtggtcaccccagaacaggctcgcattgctgaggatgcc
ggcgcttctgctgtgatggcgttggagcgcgtacctgcggatattcgtgcgcagggtggt
gtggctcgtatgtctgatcctgatttgatcgagggcattgttaatgctgtgtcgatcccg
gtgatggctaaggctcgtattggccattttgtggaggctcagattttggagtctttgggt
gtggactttatcgacgagtccgaggtgctgtcgcctgcggattatgtgaaccacattgat
aagtggaacttcgatgtgcctttcgtgtgtggtgctaccaacttgggcgaggcgttacga
cgcatcaccgagggcgctgccatgatccgctctaagggtgaggccggcactggtgatgtt
tccgaggctgtgaagcacctgcgcaccatccgtggtgagatcaaccgtttgcgcagcatg
gatgaggatcagctttatgttgctgctaaggagattcaggctccttatgatcttgtccgt
gaggttgctgcaaccggcaagctgcctgttaccctctttgttgctggtggtgttgccacg
cctgccgacgccgccttggtgatgcagatgggggccgagggtgtgttcgtgggctccggt
attttcaagtccggtaaccctgctgcgcgtgctgctgcgatcgtgaaggccaccaccatg
tatgacgatcctgctgctatcgcagaggtgtctcgcggcctaggcgaggcaatggtcggc
attaacgttgccgatgttcctgcacctcaccgtttggctgagcgcggatggtaa
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