| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
cdv Corynebacterium diphtheriae VA01
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cdv00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDVA01_0338 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cdv03021]
CDVA01_0338 (rpoC)
03400 DNA repair and recombination proteins [BR:cdv03400]
CDVA01_0338 (rpoC)
Enzymes [BR:cdv01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDVA01_0338 (rpoC)
Transcription machinery [BR:cdv03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDVA01_0338 (rpoC)
DNA repair and recombination proteins [BR:cdv03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDVA01_0338 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
356107..359874
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| AA seq |
1255 aa
MTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLERIIYFAANIITSVDD
EARHADQTTLEAEMLLEKKDVEADMESEIAERAAKLEEDLAELEAAGAKADARNKVKKAA
EKEMQHIRERAEREIDRLEEIWQTFIKLAPKQMIIDETIYEELVDRYEDYFTGGMGAEAI
QTLIRNFDLDSEAEELREIINNGKGQKKMRALKRLKVVAAFQRSGNDPAGMVLDCIPVIP
PELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIELGAPEIIVNNEKRMLQESVDAL
FDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHEC
GLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQRPEVWDVLEEAISEHPVMLNRA
PTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQMAVHLPLSAEAQAEARILMLA
SNNILSPASGKPLAMPRLDMVTGLYYLTMDKNENEIGGQGAYAPATEEGPAQGVYSSYAE
AIMARDRGVLGLQAKIKVRISHLRPPVDIEAEQFPEGWNKGDVWLADTTLGRIMFNELLP
WNYPYLEGVMVRKGGGTGKIMLGDVINDLAATYPMITVAQTMDKMKDAGFYWATRSGVTI
TMSDVLVLPNKEEILDRYEAEARKIERKYWEQGALTERERYDRLVELWKDATDEVGNAVE
KLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGDYITRPIKTSFREGLSVLEYF
NNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGIRVPVAVEVKDAEG
NVTGYTGHSLIETSVAGRVAATAVKDAEGNVMVEPGENLTDQLIDELIAAGVKEVKVRSV
LTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGGDIT
GGLPRVQELFEARVPKNRAPIASVAGTVHLDDEGNFYTLTINPDDGSDVVVYEKLSKRQG
LATVRVPMESNPGAMIERTLAEGDHVEVGDRLLRGPADPHDVLEVLGRRGVEQHLVDEVQ
DVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGTLVDLSEAKAANAEALANGGQ
PAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENVIIGKLIP
AGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGYGEFTGASVPLDEAYDL |
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| NT seq |
3768 nt +upstreamnt +downstreamnt
gtgaccaagtctaaggttcgccgtgagcgcatgggccacattgagttggctgcaccagtg
actcacatctggtacttcaagggtgttccatcccgcttgggctacctgctggacttggct
ccaaaggatcttgagcgcatcatctacttcgcagctaacatcatcaccagtgttgatgat
gaggctcgccacgctgaccagaccactttggaagcagaaatgcttctggagaagaaggac
gtcgaggcggacatggagtccgaaatcgccgagcgtgccgccaagctggaagaagacctt
gcagaactcgaagcagccggcgctaaagccgacgctcgcaacaaggtcaagaaggctgcc
gagaaggaaatgcagcacatccgcgagcgcgcggagcgtgagatcgaccgccttgaggag
atctggcagaccttcatcaagcttgctcctaagcagatgatcatcgatgagaccatctac
gaagagcttgtggaccgctacgaggattacttcaccggcggcatgggcgcagaggctatc
cagaccctgatccgcaacttcgacctcgactccgaggctgaagaactacgcgagatcatc
aacaacggcaagggccagaagaagatgcgtgccctgaagcgactgaaagttgttgcagcc
ttccagcgttcaggtaacgatccagctggcatggttttggattgcattcctgtgatccca
ccagagcttcgccccatggtgcagctcgacggtggccgctttgcaacctccgacctcaac
gacctataccgtcgtgtaatcaaccgcaacaaccgcctcaagcgcatgattgaactcggt
gcccctgagatcatcgtgaacaacgagaagcgcatgttgcaggagtccgtggacgcgttg
ttcgacaacggccgccgcggtcgcccagtcaccggtcctggtaaccgtccgctgaagtcc
ctgtctgacttgctcaagggcaagcagggccgcttccgtcagaacttgctgggtaagcgt
gtcgactactccggtcgttccgttattatcgttggtcctcagctcaagctccacgagtgt
ggtctgcctaagctgatggctctcgagctgttcaagccgttcgtgatgaaacgcctcgtg
gaaaacgactacgcgcagaacatcaagtcggcaaagcgcatggtggaacgccagcgtcca
gaggtgtgggacgtcctcgaagaggcaatttccgagcacccagtgatgctcaaccgtgca
cctaccctgcaccgcctgggtattcaggcattcgagccaaagcttgtcgagggtaaagca
attcagctgcacccattggcatgtgaagccttcaacgccgacttcgacggtgaccagatg
gcagtccacctgccactgtccgctgaggctcaggcagaagctcgcatcctcatgctggcc
tcgaacaacattctttcccctgcatcgggtaagccacttgccatgccacgtctagacatg
gtgaccggcctgtactacctgaccatggacaagaacgaaaacgagatcggcggccagggc
gcatacgctccagcaaccgaagaaggaccagcgcagggcgtgtactcgtcttatgctgag
gccatcatggcgcgtgaccgcggtgttctcggcctgcaggctaagatcaaggtgcgtatt
tctcacctgcgtccaccagtagacatcgaggccgagcagttcccagagggctggaacaag
ggcgatgtttggttggcagacaccaccttgggtcgcatcatgttcaacgaactgctgcct
tggaactacccataccttgaaggtgtgatggttcgtaagggtggcggcaccggcaagatc
atgctcggtgacgtgattaacgacctcgcagcaacctacccaatgatcactgttgctcag
acgatggacaagatgaaggatgccggtttctactgggcaacccgttctggcgtgaccatc
accatgtctgacgtgctcgttcttcctaacaaggaagaaatccttgaccgctacgaggcc
gaggcacgcaagattgagcgcaagtactgggagcagggtgctctaaccgagcgcgagcgt
tacgaccgcctcgttgagctgtggaaagacgctaccgacgaggttggtaacgccgtcgag
aagctctacccagacgacaacccaattccaatgatcgtgaagtcgggcgctgccggtaac
atgcgtcagatctggacgcttgctggtatgaagggcatggttgtgaactcgaagggtgac
tacatcacccgcccgattaagacctccttccgtgaaggcctgtcggttctcgagtacttc
aacaactcccacggttcccgtaagggtctggccgataccgctctgcgtaccgcagactcc
ggttacctcacccgtcgtctcgtcgacgtggcacaggacgttatcgtccgcgaagacgac
tgtggcaccaagcagggcattcgtgttcctgtagccgttgaagtcaaggacgctgagggc
aacgtgaccggttacaccggacacagcctgatcgaaacctccgtggccggtcgtgtggca
gctaccgcagtcaaggacgccgaaggcaacgtcatggtcgagccaggtgagaacctgacc
gatcagcttatcgacgagctcatcgccgctggagttaaggaagtcaaggtccgctcggtc
ttgacttgccagaccccaaccggtgtgtgcgccaagtgctacggcaagtccatggcaacc
ggcaagctggtcgacatcggagaagcagtcggtattgtggctgcacagtcgattggtgag
cctggtacccagctgacaatgcgtacgttccaccagggtggtgtcggtggcgacattacc
ggtggtctgcctcgtgtccaggagctcttcgaggctcgtgttcctaagaaccgtgcaccg
atcgcttctgtcgcaggtaccgtccaccttgatgacgaaggcaacttctacaccctgacc
atcaacccagacgatggatctgacgttgtggtctacgagaagctgtcgaagcgtcagggc
ttggcaactgtccgcgttccaatggaatccaacccaggtgccatgattgagcgcaccttg
gccgagggtgaccatgttgaggttggcgaccgcctgctgcgcggccctgccgatccacat
gatgtactcgaggttctgggtcgccgtggtgttgagcagcaccttgtcgacgaggtgcag
gacgtctaccgtgcccagggtgtggctattcacgataagcacatcgaaatcatcattcga
cagatgctgcgtcgcggaaccgtcatcgagtctggttccaccgagttcctcccaggtacg
ctggtggatctgtccgaggctaaagctgcaaacgctgaggcattggcaaacggtggccag
ccagcagagcttcgctccgagatcatgggtatcaccaaggcttccttggcaaccgagtcg
tggctatccgccgcatcgttccaggaaaccactcgtgtgcttaccgacgccgctatcaac
aagcgctccgacaagctgatcggcctgaaggagaacgtgatcatcggtaagctgatccca
gctggtaccggtatctctcgttaccgcaacatctccgtgaagccaaccgaggctgcacga
aatgccgcatactcgatcccaacatatggtgattcgatctacggtgatgatggctacggt
gagttcaccggagcttcggttccactggatgaggcatacgacctctaa |
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