Corynebacterium diphtheriae VA01: CDVA01_0715
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Entry
CDVA01_0715 CDS
T01702
Symbol
pcrA
Name
(GenBank) putative ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdv
Corynebacterium diphtheriae VA01
Pathway
cdv03420
Nucleotide excision repair
cdv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDVA01_0715 (pcrA)
03430 Mismatch repair
CDVA01_0715 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdv03400
]
CDVA01_0715 (pcrA)
Enzymes [BR:
cdv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDVA01_0715 (pcrA)
DNA repair and recombination proteins [BR:
cdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDVA01_0715 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CDVA01_0715 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
OstA_2
CarD_TRCF_RID
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEX82984
LinkDB
All DBs
Position
753318..755804
Genome browser
AA seq
828 aa
AA seq
DB search
MNNNEPFSQSPFGTNAAAAPSTSMASQANPFLRQAQPVSQYTGADLTEGLNPQQKAAVEH
YGSPLLIVAGAGSGKTSVLTRRIAYLMRVRGVQPQNILAITFTNKAAAEMRERVSSLVGP
VAQRMWVSTFHSTCVRILREQAQLVPGFNTNFTIYDSDDSKRLLSMISKDFSLDIKKFTP
RLLATGISNLKNELIDADQACADAESTKNPYETTIASVFAEYQKRLRASNAVDFDDLIGE
TVRIFREHPPVTEYYRRRFRHVLIDEYQDTNHAQYALIHELVGSGPDASELCVVGDSDQS
IYAFRGATIRNIEEFERDYPNAETILLEQNYRSTQTILNAANSVIAQNENRREKKLWTAL
GSGDPIVGYVADNEHDEARFIANEVDALADKGVAYSDIAVMYRTNNSSRAVEDVFMRTGI
PYKVVGGTRFYERKEIRDIIAYLRLIDNPDDAVSLRRIINTPRRGIGDKAVAFLSLHADN
HNVGFHKALLDATEDKVSMLGARGRNAVTGFVDMMKGIREEAANKVNEVTGMPDIGDMVS
YILDVTGYKAELEKSNDPQDGARLDNLNELVSVAREFSSEAANQVAYERMGAENQAPEIP
ELSEGEAAPGSLMAFLERVSLVADADQIPDNEQGVVTLMTLHTAKGLEFPVVFLTGWEDG
QFPHLRALGEPKELAEERRLAYVGITRARRTLYLSRAMLRSSWGNPVTNPPSRFLSEIPD
ELMDWRREEPEHSYDNSWGMGYGSSNSRSYGSQNSRSYSSPRTPKLPKHSNKPAIALNVG
DRVNHEKYGLGTVTKVDKMAPADSVTIDFGSSGTVRLMLIGSVPMEKL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacgaacccttctctcagtctccctttggaaccaacgcagcagcggcgccg
tcgacgagcatggcatcgcaagcgaatccgtttctccgccaagctcagcccgtatcgcag
tacaccggtgccgacctcaccgaaggtctgaatccgcagcaaaaagcagcagtggagcat
tatggatccccgctgctgatcgttgcaggcgctggatctggtaagacatctgtgctgaca
cggcgaattgcctacttgatgcgtgttcgaggtgtacaaccgcagaacatcttggcaatt
acgtttaccaataaagcagcagcagagatgcgtgagcgtgtcagctctttggtggggcct
gtagcccagcgcatgtgggtatcgacattccactccacgtgcgtgcgtattttgcgggaa
caggcacagcttgttcctgggtttaacactaatttcacgatctatgactcggatgattcc
aagcgattgttgtccatgatctccaaggatttcagcttggatattaagaagttcacacca
cggttgctggcaactggaatttctaatcttaaaaatgagctgatcgatgccgaccaagca
tgcgctgatgcggaaagcacgaagaatccctatgagactacgatcgcaagcgttttcgct
gaatatcaaaagagactacgagcgtcgaacgccgtcgattttgatgacctcatcggggag
acagtacggattttccgtgagcacccgccggttacggaatactatcggcgtaggttccgg
cacgtgcttatcgacgagtatcaggacactaaccacgcgcagtatgcattaattcatgag
cttgttggaagtggacctgatgctagcgagttgtgcgtcgttggtgactcggaccagtca
atttatgcgtttcgtggtgccacaattcgaaatattgaggaattcgaacgcgattaccct
aatgctgagacgattctgcttgagcaaaattaccgttccacccaaacgattcttaatgct
gccaattcggtgatcgctcaaaatgagaatcgtcgagaaaagaaattatggacagctcta
ggcagcggtgatcccattgtcggatatgtcgccgacaacgagcacgatgaagcccgtttt
attgccaatgaggtcgacgcgttggctgataaaggggtggcatattccgatattgctgtc
atgtatcgtacgaacaactcttctcgtgctgtagaagacgtctttatgcgaaccggcata
ccgtacaaagtcgtaggcggtacccgcttttatgagcgtaaagagattcgcgacatcatt
gcttatcttcgtcttattgataaccccgatgatgcggtgtctttgcgtcgaatcattaat
actccacgccgaggcattggcgataaagccgtagcatttctgtcactccacgcagataac
cacaacgtaggcttccacaaagcattgctagatgccaccgaagataaagtttccatgctt
ggcgcacgtggccgaaatgctgtcactggattcgttgacatgatgaaggggattcgcgaa
gaggccgcaaacaaagtcaatgaagtgaccgggatgcctgatatcggagatatggtgtcc
tacattttggacgtcaccggatacaaagccgaattagaaaaaagcaatgatcctcaagat
ggtgcaaggctcgataacctcaacgaactggtatcagttgctcgagaattctcctcagaa
gctgccaaccaagtagcctatgagcgcatgggggcggagaaccaagccccagagatccca
gagttaagcgaaggcgaagcagcgccaggtagccttatggccttcctagagcgcgtgtcg
ttggttgctgatgccgatcagattccagataacgaacaaggcgtcgtcacattaatgaca
ctgcacaccgcaaagggccttgagttccccgtcgtgttcctcaccggctgggaagacggt
cagttcccgcatctgcgtgctctaggagagcctaaggagctagcagaagagcgtcgacta
gcctatgtcggtattacgcgtgcacgccgaaccctctacttgtcccgcgcgatgcttcga
tcctcgtggggaaatccagtgaccaaccctccgtcacggttcttatcagaaatacctgat
gaactaatggattggcgtagagaagaaccagaacactcctatgacaacagctggggtatg
ggctacggttcatctaattcgcgttcttatggatcccagaactctcgttcttatagttct
ccgcgaactcccaagttacctaagcattccaacaagccggcaatagcactcaacgttggt
gatcgtgtaaaccatgaaaagtatgggcttggcacagtaaccaaggtagacaagatggct
cccgcagattctgtcaccattgactttgggtcgtcaggaacagtgcggctaatgctgatc
ggttcagtgcctatggaaaagctctag
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