Corynebacterium diphtheriae VA01: CDVA01_1018
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Entry
CDVA01_1018 CDS
T01702
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cdv
Corynebacterium diphtheriae VA01
Pathway
cdv03030
DNA replication
cdv03410
Base excision repair
cdv03420
Nucleotide excision repair
cdv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDVA01_1018 (polA)
03410 Base excision repair
CDVA01_1018 (polA)
03420 Nucleotide excision repair
CDVA01_1018 (polA)
03440 Homologous recombination
CDVA01_1018 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdv03032
]
CDVA01_1018 (polA)
03400 DNA repair and recombination proteins [BR:
cdv03400
]
CDVA01_1018 (polA)
Enzymes [BR:
cdv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDVA01_1018 (polA)
DNA replication proteins [BR:
cdv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CDVA01_1018 (polA)
DNA repair and recombination proteins [BR:
cdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CDVA01_1018 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDVA01_1018 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
DUF2275
DUF4880
Motif
Other DBs
NCBI-ProteinID:
AEX83287
LinkDB
All DBs
Position
1068633..1071332
Genome browser
AA seq
899 aa
AA seq
DB search
MLDVLVTLAIVTSNANRLMLIDGHSMAFRAFYALPAENFSTSGGQATNAVYGFLSMLSSL
LVEEKPTHVAVAFDVGRQTFRTEMFPEYKAQREAAPPEFKGQVEIIKEVLETLGITTLEK
ENFEADDIIATLATAAGPLGFDTYIVTGDRDSFQLVNESTTVLYPMRGVSVLHRFTPEAV
EEKYGLTPVQYPDFAALRGDPSDNLPNIPGVGEKTATKWIVQYGNLDSLLAHADEIKGKA
GNSFRERLDQVCMNRTLTEMVKDLELPYAPDQLERKPADASAIASKFDELEFGSNLRDRV
IHAVDAQGNVSEEPEEDKPEVVIDHEKLASWLATRAGQSLALYVRGHGSPASGDAESAAI
VDKQFHAVALDFGDLDADDDQAFAQWIASDSPKYLHEAKAVFHMLAGRGYTLNGIEHDTA
IAGYLLRPGQRTYDLKDVYQRHLQRQLGCGSSESGQLSLLDAPDAQELVDSAVAILELSK
SLTAQLQAIDAYELYREMELPLVGVLARMEATGICVDVATLREQRDIFVEQVKEEESAAR
ELAGDETLNLSSPKQLQVVLFDTLGLPKTKKTKTGYSTAAKEIESLAVKNPHPFLDHLLA
HREFQKMKTTLDGLIKAVGDDGRIHTTFNQTVASTGRLSSTEPNLQNIPVRTPAGRKIRS
AFVVGQGYKSLLTADYSQIEMRVMAHLSEDPGLIEAYQTGEDLHNFVGSKVFDVPVDQVT
PELRRRVKAMSYGLVYGLSAFGLSQQLNIPAGEAKVIMESYFERFGGVKQYLDQVVEQAR
KDGFTSTLFGRRRYLPELSSDNRVARENAERAALNAPIQGTAADIIKIAMLRVDARLTAE
NCQSRVLLQVHDELVLEVASGEQEKVQQLVEEEMDAAISLRVPLEVSAGVGTNWEEAAH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtactcgttacactggccatcgtgacttccaatgcgaaccgactcatgctt
atcgacggccactcgatggccttccgtgcgttctacgcgctgcctgcggagaacttctct
acatcgggtggacaggcgacgaatgccgtttacggatttttgtcgatgttgtcgtctctg
ctcgttgaagaaaagccaacccacgtagcagttgcgttcgacgttggccgccaaacattt
cgaaccgagatgttccctgaatacaaagcgcagcgtgaggctgcgccaccagaattcaag
ggacaggtggaaattattaaagaggtcctagagactttgggaatcaccaccttggaaaaa
gaaaattttgaggcggacgatatcatcgccacgttggctaccgcagcgggcccacttggt
tttgatacgtatatcgttactggtgatcgcgattctttccaactagtaaacgaatcaacc
acggtgctgtatcccatgcgtggtgtatctgttctgcatcgtttcaccccagaagcggtg
gaagaaaaatatggattaactccagtacagtatccagatttcgcggcattgcggggagat
ccttcagataatttgcctaatatcccaggtgttggtgagaaaaccgctacaaagtggatc
gtccaatatggaaatctggattccttacttgctcatgccgatgagattaagggcaaagct
ggtaatagcttccgagagcgtttagatcaggtgtgtatgaatcgcactttgactgagatg
gtcaaggatctcgaacttccttatgctccagatcagctcgagcgtaaacccgctgatgcc
tcggcaattgcatctaagtttgatgaacttgaatttggatcgaatctccgtgatcgagta
atccatgcagttgatgcgcaagggaacgtctctgaagagcctgaagaagacaagcctgaa
gtcgtcatcgaccatgaaaaactagcatcatggcttgccactcgtgctgggcagtcgctg
gcattgtatgtgcgaggccatggtagtcccgccagtggtgatgctgagtcggcggcgatc
gtcgataagcaatttcatgctgtagcgcttgatttcggtgaccttgacgccgatgacgac
caagcatttgcgcagtggattgctagtgattcgcctaaatacctacatgaagctaaagct
gtatttcatatgctcgcaggcaggggctacactctcaacggcatcgagcatgataccgca
attgcggggtacttattgcgccctggccagcgcacgtatgatctgaaagacgtgtatcag
cgccatttgcaacgtcaactaggttgcggttctagcgagagcggtcaactctcgttgctt
gacgcacctgatgctcaagaacttgttgacagtgctgtagcgattttggagttaagcaaa
tcgcttactgcgcaactacaagctatcgacgcatatgagctctatcgggaaatggagctt
ccgctcgttggcgtgttggcgcgcatggaggcaactggaatttgcgttgatgtggccaca
ttgcgggaacagcgagacatatttgttgagcaggttaaagaagaagaaagcgctgcccgg
gaactcgcgggggatgagactctaaatctgtcgagcccaaagcagcttcaagtagtttta
tttgacacattagggcttcctaagactaagaagaccaagactggatactccacggcagca
aaagaaatagaatcgctggctgttaaaaatccacatccgttccttgatcatctcttggcg
catcgagagttccaaaagatgaaaacaactctagacggcctcattaaagcagtcggagat
gacggtcgtattcacactacgtttaatcaaactgtcgcctcaactggtcgtttaagttca
acggaaccaaacctgcaaaacattcctgtgcgtactccagcagggaggaaaattcgctct
gcttttgtggtaggacaagggtataagtctctgctgacggcagactattcgcagattgag
atgcgtgtgatggcgcatctttctgaggatccaggtttgattgaggcttatcaaacgggt
gaggacctccacaatttcgtgggttcgaaggtcttcgatgtgccagttgatcaagtaact
cctgaactacgtcgccgagttaaagcgatgagctatgggttggtctatgggctttctgca
tttggtctttcccaacaattaaatatccctgctggtgaagccaaagtgatcatggaaagc
tacttcgaacgattcggaggggtaaaacaatatcttgaccaagtggtcgaacaagcccga
aaggatgggttcacatcgactttgtttggccgtcgacgttacttgccggagctttcttca
gataatcgagtggcacgtgaaaatgccgaacgagctgcattgaatgctccaattcaaggc
acagcagcagacattattaagattgcaatgctgcgtgtcgacgcccgccttactgcagaa
aactgccaatcgagggtgcttcttcaagtccacgacgaattagtgctcgaggtagcttca
ggtgaacaagaaaaggttcaacaacttgtagaagaagaaatggacgccgctatttcactg
cgcgtaccgctggaggtttctgcaggtgtcggtacaaactgggaagaagctgcgcattaa
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