Corynebacterium diphtheriae VA01: CDVA01_1354
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Entry
CDVA01_1354 CDS
T01702
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdv
Corynebacterium diphtheriae VA01
Brite
KEGG Orthology (KO) [BR:
cdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdv03016
]
CDVA01_1354 (truB)
Enzymes [BR:
cdv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDVA01_1354 (truB)
Transfer RNA biogenesis [BR:
cdv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDVA01_1354 (truB)
Prokaryotic type
CDVA01_1354 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
HK
Motif
Other DBs
NCBI-ProteinID:
AEX83621
LinkDB
All DBs
Position
1447162..1448064
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AA seq
300 aa
AA seq
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MNDALANSGLVIVDKPEGMTSHDVVSKIRRTFSTKKVGHAGTLDPMATGVLVLGLERGTK
FLAHMVASTKSYAATIRLGAATTTDDREGETIASASPDQLAAITETKISDAVKQFRGSIM
QRPAAVSAIKIDGKRAHQRVREGEKVEIPARPVTISRYDILEIRRDAAFIDIDVEVDCSS
GTYIRSLARDLGEELGVGGHLTALRRTQVGPFTLDNAVTLEKLEENPHVSLTLDQALAAS
YPVLSVSEKEASDLAMGKWLTPRGLKGIHAAVDPHGRAIALVKEQGKRLATIFVARPSTL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccctcgcaaactcaggccttgtgattgtcgacaaacccgaaggaatgacc
tcccacgacgttgtttctaaaatccgtcggaccttttccaccaaaaaggtgggtcatgcc
ggaaccctcgaccctatggctacaggagtgctcgtattaggactagagcgcgggaccaaa
ttcctagcacatatggttgcgtccacaaagtcctatgcggccactattcgtctcggtgct
gctactactaccgacgaccgtgaaggcgaaacgatcgcttcagcttcaccagatcaactg
gcagcaatcaccgaaaccaagatctccgatgccgttaagcagtttcggggatctatcatg
caacgtcctgccgcagtgagcgctatcaagatagatgggaaaagagcgcatcaacgcgta
cgagaaggtgaaaaagtagaaattccagcacggccggtcaccatttctcggtatgacatt
ttagagattcgtcgagacgcagctttcatcgacatcgacgtagaagttgattgttcttcc
ggaacctacattcggtcactagcccgtgatctcggcgaagaactcggagtaggtgggcac
ttaaccgcgttacgacgaacacaggtaggaccgtttacgctcgataatgctgtaacactc
gaaaaattggaagaaaacccacacgtatctttgacccttgaccaggcattagcagcgagc
tacccagttctttctgtttcagaaaaagaggcgagtgatctcgccatgggcaaatggctc
actccacgcggtctgaaaggaatccatgcagcggtcgatcctcatggacgtgctatcgcc
ttggtaaaagaacaaggcaaacggctagccaccatatttgtggcacgtccatcgaccctt
taa
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