Corynebacterium diphtheriae PW8: CDPW8_0445
Help
Entry
CDPW8_0445 CDS
T01701
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cdw
Corynebacterium diphtheriae PW8
Pathway
cdw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDPW8_0445 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdw03021
]
CDPW8_0445 (rpoC)
03400 DNA repair and recombination proteins [BR:
cdw03400
]
CDPW8_0445 (rpoC)
Enzymes [BR:
cdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDPW8_0445 (rpoC)
Transcription machinery [BR:
cdw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDPW8_0445 (rpoC)
DNA repair and recombination proteins [BR:
cdw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDPW8_0445 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AEX69107
LinkDB
All DBs
Position
445616..449383
Genome browser
AA seq
1255 aa
AA seq
DB search
MTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLERIIYFAANIITSVDD
EARHADQTTLEAEMLLEKKDVEADMESEIAERAAKLEEDLAELEAAGAKADARNKVKKAA
EKEMQHIRERAEREIDRLEEIWQTFIKLAPKQMIIDETIYEELVDRYEDYFTGGMGAEAI
QTLIRNFDLDSEAEELREIINNGKGQKKMRALKRLKVVAAFQRSGNDPAGMVLDCIPVIP
PELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIELGAPEIIVNNEKRMLQESVDAL
FDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHEC
GLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQRPEVWDVLEEAISEHPVMLNRA
PTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQMAVHLPLSAEAQAEARILMLA
SNNILSPASGKPLAMPRLDMVTGLYYLTMDKNENEIGGQGAYAPATEEGPAQGVYSSYAE
AIMARDRGVLGLQAKIKVRISHLRPPVDIEAEQFPEGWNKGDVWLADTTLGRIMFNELLP
WNYPYLEGVMVRKGGGTGKIMLGDVINDLAATYPMITVAQTMDKMKDAGFYWATRSGVTI
TMSDVLVLPNKEEILDRYEAEARKIERKYWEQGALTERERYDRLVELWKDATDEVGNAVE
KLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGDYITRPIKTSFREGLSVLEYF
NNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGIRVPVAVEVKDAEG
NVTGYTGHSLIETSVAGRVAATAVKDAEGNVMVEPGENLTDQLIDELIAAGVKEVKVRSV
LTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGGDIT
GGLPRVQELFEARVPKNRAPIASVAGTVHLDDEGNFYTLTINPDDGSDVVVYEKLSKRQG
LATVRVPMESNPGAMIERTLAEGDHVEVGDRLLRGPADPHDVLEVLGRRGVEQHLVDEVQ
DVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGTLVDLSEAKAANAEALANGGQ
PAELRSEIMGITKASLAIESWLSAASFQETTRVLTDAAINKRSDKLIGLKENVIIGKLIP
AGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGYGEFTGASVPLDEAYDL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtctaaggttcgccgtgagcgcatgggccacattgagttggctgcaccagtg
actcacatctggtacttcaagggtgttccatcccgcttgggctacctgctggacttggct
ccaaaggatcttgagcgcatcatctacttcgcagctaacatcatcaccagtgttgatgat
gaggctcgccacgctgaccagaccactttggaagcagaaatgcttctggagaagaaggac
gtcgaggcggacatggagtccgaaatcgccgagcgtgccgccaagctggaagaagacctt
gcagaactcgaagcagccggcgctaaagccgacgctcgcaacaaggtcaagaaggctgcc
gagaaggaaatgcagcacatccgcgagcgcgcggaacgtgagatcgaccgccttgaggag
atctggcagaccttcatcaagcttgctcctaagcagatgatcatcgatgagaccatctac
gaagagcttgtggaccgctacgaggattacttcaccggcggcatgggcgcagaggctatc
cagaccctgatccgcaacttcgacctcgactccgaggccgaagaactacgcgagatcatc
aacaacggcaagggccagaagaagatgcgtgccctgaagcgactgaaggttgttgcagcc
ttccagcgttcaggtaacgatccagctggcatggttttggattgcattcctgtgatccca
ccagagcttcgccccatggtgcagctcgatggtggccgctttgcaacctccgacctcaac
gacctataccgtcgtgtaatcaaccgcaacaaccgcctcaagcgcatgattgaactcggt
gcccctgagatcatcgtgaacaacgagaagcgcatgttgcaggagtccgtggacgcgttg
ttcgacaacggccgccgcggtcgcccagtcaccggtcctggtaaccgtccgctgaagtcc
ctgtctgacttgctcaagggcaagcagggccgcttccgtcagaacttgctgggtaagcgt
gtcgactactccggtcgttccgttattatcgttggtcctcagctcaagctccacgagtgt
ggtctgcctaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgcctcgtg
gaaaacgactacgcgcagaacatcaagtcggcaaagcgcatggtggaacgccagcgtcca
gaggtgtgggacgtcctcgaagaggcaatttccgagcacccagtgatgctcaaccgtgca
cctaccctgcaccgcctgggtattcaggcattcgagccaaagcttgtcgagggtaaagca
attcagctgcacccattggcatgtgaagccttcaacgccgacttcgacggtgaccagatg
gcagtccacctgccactgtccgctgaggctcaggcagaagctcgcatcctcatgctggcc
tcgaacaacattctttcccctgcatcgggtaagccacttgccatgccacgtctagacatg
gtgaccggcctgtactacctgaccatggacaagaacgaaaacgagatcggcggccagggc
gcatacgctccagcaaccgaagaaggaccagcacagggcgtatactcgtcttatgctgag
gccatcatggctcgtgaccgcggcgttctgggcctgcaggctaagatcaaggtgcgtatt
tctcacctgcgtccaccagtagacatcgaggccgagcagttcccagagggctggaacaag
ggcgatgtttggttggcagacaccaccttgggtcgcatcatgttcaacgaactgcttcct
tggaactacccataccttgaaggtgtgatggttcgtaagggtggcggcaccggcaagatc
atgctcggtgacgtgattaacgacctcgcagcaacctacccaatgatcactgttgctcag
acgatggacaagatgaaggatgccggtttctactgggcaacccgttctggcgtgaccatc
accatgtctgacgtgctcgttcttcctaacaaggaagaaatccttgaccgctacgaggcc
gaggcacgcaagattgagcgcaagtactgggagcagggtgctctaaccgagcgcgagcgt
tacgaccgcctcgttgagctgtggaaggacgctaccgacgaggttggtaacgccgtcgag
aagctctacccagacgacaacccaattccaatgatcgtgaagtcgggtgccgccggtaac
atgcgtcagatctggacgcttgctggtatgaagggcatggttgtgaactcgaagggtgac
tacatcacccgcccgattaagacctccttccgtgaaggcctgtcggttctcgagtacttc
aacaactcccacggttcccgtaagggtctggccgataccgctctgcgtaccgcagactcc
ggttacctcacccgtcgtctcgtcgacgtggcacaggacgttatcgtccgcgaagacgac
tgtggtaccaagcagggcattcgtgttcctgtagccgttgaagtcaaggacgctgagggc
aacgtgaccggttacaccggacacagcctgatcgaaacctccgtggccggtcgtgtggca
gctaccgcagtcaaggacgccgaaggcaacgtcatggtcgagccaggtgagaacctgacc
gatcagcttatcgacgagctcatcgccgctggagtcaaggaagtcaaggtccgctcggtc
ttgacctgccagaccccaaccggtgtgtgcgcaaagtgctacggcaagtccatggcaacc
ggcaagctggtcgacatcggagaagcagtcggtattgtggctgcacagtcgattggtgag
cctggtacccagctgacaatgcgtacgttccaccagggtggtgtcggtggcgacattacc
ggtggtctgcctcgtgtccaggagctcttcgaggctcgtgttcctaagaaccgtgcaccg
atcgcttctgtcgcaggtaccgtccaccttgatgacgaaggcaacttctacaccctgacc
atcaacccagacgatggatctgacgttgtggtctacgagaagctgtcgaagcgtcagggc
ttggcaactgtccgcgttccaatggaatccaacccaggtgccatgattgagcgcaccttg
gccgagggcgaccatgttgaggttggcgaccgcctgctgcgcggccctgccgatccacat
gacgtactcgaagttctgggtcgccgtggtgttgagcaacaccttgtcgacgaggtgcag
gacgtctaccgtgcccagggtgtggctatccacgataagcacatcgaaatcatcattcga
cagatgctgcgtcgcggaaccgtcatcgagtctggttccaccgagttcctcccaggtacg
ctggtggatctgtccgaggctaaagctgcaaacgctgaggcattggcaaacggtggccag
ccagcagagcttcgctccgagatcatgggtatcaccaaggcttccttggcaatcgagtcg
tggctatccgccgcatcgttccaggaaaccactcgtgtgcttaccgacgccgctatcaac
aagcgctccgacaagctgatcggcctgaaggagaacgtgatcatcggtaagctgatccca
gctggtaccggtatctctcgttaccgcaacatctccgtgaagccaaccgaggctgcacga
aatgccgcatactcgatcccaacatatggtgattcgatctacggtgatgatggctacggt
gagttcaccggagcttcggttccactggatgaggcatacgacctctaa
DBGET
integrated database retrieval system
