Corynebacterium diphtheriae PW8: CDPW8_0807
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Entry
CDPW8_0807 CDS
T01701
Symbol
pcrA
Name
(GenBank) putative ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdw
Corynebacterium diphtheriae PW8
Pathway
cdw03420
Nucleotide excision repair
cdw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDPW8_0807 (pcrA)
03430 Mismatch repair
CDPW8_0807 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdw03400
]
CDPW8_0807 (pcrA)
Enzymes [BR:
cdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDPW8_0807 (pcrA)
DNA repair and recombination proteins [BR:
cdw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDPW8_0807 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CDPW8_0807 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
OstA_2
CarD_TRCF_RID
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEX69463
LinkDB
All DBs
Position
821344..823830
Genome browser
AA seq
828 aa
AA seq
DB search
MNNNEPFSQSPFGTNAAAAPSTSMASQANPFLRQAQPVSQYTGADLTEGLNPQQKAAVEH
CGSPLLIVAGAGSGKTSVLTRRIAYLMRVRGVQPQNILAITFTNKAAAEMRERVSSLVGP
VAQRMWVSTFHSTCVRILREQAQLVPGLNTNFTIYDSDDSKRLLSMISKDFSLDIKKFTP
RLLATGISNLKNELIDADQACADAESTKNPYETTIASVFAEYQKRLRASNAVDFDDLIGE
TVRIFREHPPVTEYYRRRFRHVLIDEYQDTNHAQYALIHELVGSGPDASELCVVGDSDQS
IYAFRGATIRNIEEFERDYPNAETILLEQNYRSTQTILNAANSVIAQNENRREKKLWTAL
GSGDPIVGYVADNEHDEARFIANEVDALADKGVAYSDIAVMYRTNNSSRAVEDVFMRTGI
PYKVVGGTRFYERKEIRDIIAYLRLIDNPDDAVSLHRIINTPRRGIGDKAVAFLSLHADN
HNVGFHKALLDATEDKVSMLGARGRNAVTGFVDMMKGIREEAANKVNEVTGMPDIGDMVS
YILDVTGYKAELEKSNDPQDGARLDNLNELVSVAREFSSEAANQVAYERMGAESQAPEIP
ELSEGEAAPGSLMAFLERVSLVADADQIPDNEQGVVTLMTLHTAKGLEFPVVFLTGWEDG
QFPHLRALGEPKELAEERRLAYVGITRARRTLYLSRAMLRSSWGNPVTNPPSRFLSEIPD
ELMDWRREEPEHSYDNSWGMGYGSSNSRSYGSQNSRSYSSPRTPKLPKHSNKPAIALNVG
DRVNHEKYGLGTVTKVDKMAPADSVTIDFGSSGTVRLMLIGSVPMEKL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacgaacccttctctcagtctccctttggaaccaacgctgcagcggcgccg
tcgacgagcatggcatcgcaagcgaatccgtttctccgccaagctcagcccgtatcgcag
tacaccggcgccgacctcaccgaaggtctgaatccgcagcaaaaagcagcagtggagcat
tgtggatccccactgctgatcgttgcaggcgctggatccggtaagacatctgtgctgaca
cggcgaattgcctacttgatgcgtgttcgaggtgtacaaccgcagaacatcttggcaatt
acgtttaccaataaagcagcagcagagatgcgtgagcgtgtgagctctttggtggggcct
gtagcccaacgcatgtgggtatcgacattccactccacgtgcgtgcgtattctgcgggaa
caggcacagcttgttcctgggcttaacactaatttcacgatctatgactcggatgattcc
aagcgattgttgtccatgatctccaaggatttcagcttggatattaagaagttcacacca
cggttgctggcaactggaatttctaatcttaaaaatgagctgattgatgccgaccaagca
tgtgctgatgcggaaagcacgaagaatccctatgagactacgatcgcaagcgttttcgct
gaatatcaaaagagactacgagcgtcgaacgccgtcgattttgatgacctcatcggggag
acagtacggattttccgtgagcacccgccggttacggaatactatcggcgtaggttccgg
cacgtgcttatcgacgagtatcaggacactaaccacgcgcagtatgcattaattcatgag
cttgttggaagtggacctgatgctagcgagttgtgcgtcgttggtgactcggaccagtca
atttatgcgtttcgtggtgccacaattcgaaatattgaggaattcgaacgcgattaccct
aatgctgagacgattctgcttgagcaaaattaccgttccacccaaacgattcttaatgct
gccaattcggtgatcgctcaaaatgagaatcgtcgagaaaagaaattatggacagctcta
ggcagcggtgatcccattgtcggatatgtcgccgacaacgagcacgatgaagcccgtttt
attgccaatgaggtcgacgcgttggctgataaaggggtggcatattccgatattgctgtc
atgtatcgtacgaacaactcttctcgtgctgtagaagacgtctttatgcgaaccggcata
ccgtacaaagtcgtaggcggtacccgcttttatgagcgtaaagagattcgcgacatcatt
gcttatcttcgtcttattgataaccccgatgatgcggtgtctttgcatcgaatcattaat
actccacgccgaggcattggcgataaagccgtagcatttctgtcactccacgcagataac
cacaacgtaggcttccacaaagcattgctagatgccaccgaagataaagtttccatgctt
ggcgcacgtggccgaaatgctgtcactggattcgttgacatgatgaaggggattcgcgag
gaggccgcaaacaaagtcaatgaagtgactgggatgcctgatatcggagatatggtgtcc
tacattttggacgtcaccggatacaaagccgaattagaaaaaagcaatgatcctcaagat
ggtgcaaggctcgataacctcaacgaactggtatcagttgctcgagaattctcctcagaa
gctgccaaccaagtagcctatgagcgcatgggggcggagagccaagccccagagatccca
gagttaagcgaaggcgaagcagcgccaggtagccttatggccttcctagagcgcgtgtcg
ttggttgctgatgccgatcagattccagataacgaacaaggcgtcgtcacattaatgaca
ctgcacaccgcaaagggccttgagttccccgtcgtgttcctcaccggctgggaagacggt
cagttcccgcatctgcgtgctctaggagagcctaaggagctagcagaagagcgtcgacta
gcctatgtcggtattacgcgtgcacgccgaaccctctacttgtcccgcgcgatgcttcgt
tcctcgtggggaaatccagtgaccaaccctccgtcacggttcttatcagaaatacctgat
gaactaatggattggcgtagagaagaaccagaacactcctatgacaacagctggggtatg
ggctacggttcatctaattcgcgttcttatggatcccagaactctcgttcttatagttct
ccgcgaactcccaagttacctaagcattccaacaagccggcaatagcactcaacgttggt
gatcgtgtaaaccatgaaaagtatgggcttggcacagtaaccaaggtagacaagatggct
cccgcagattctgtcaccattgactttgggtcgtcaggaacagtgcggctaatgctgatc
gggtcagtgcctatggaaaagctctag
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