Corynebacterium diphtheriae PW8: CDPW8_1013
Help
Entry
CDPW8_1013 CDS
T01701
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cdw
Corynebacterium diphtheriae PW8
Pathway
cdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDPW8_1013 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdw03021
]
CDPW8_1013 (rho)
03019 Messenger RNA biogenesis [BR:
cdw03019
]
CDPW8_1013 (rho)
Transcription machinery [BR:
cdw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CDPW8_1013 (rho)
Messenger RNA biogenesis [BR:
cdw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDPW8_1013 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEX69668
LinkDB
All DBs
Position
1035037..1037100
Genome browser
AA seq
687 aa
AA seq
DB search
MTNTDNSAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAINGTSAAHPTSVAPSEE
NKADAPKKERPARRRATKHVAQDAGSEPAPVVTEVAAPAEQNPAPKQEKEAPAGESERQP
RRRRAVKTSVKTTQEEPAEVRVAEATDKSSEEQSAEAGSEDKDNYHYESRSAARRARRNR
ARREQREYNRPGTKDESEASQPENENSRNDVAPESSEVADNSNEQARSDQADQSTKSDSH
DNGREDNRRGNRHERGERGDRNDRGDRNRRNRRNRRGRDRDDNRDNRENNNNEPREDEVL
QNVAGILDIVDNNVAFVRTSGYHAGAADVYVNNQMIRRLGLRSGDAIVGQVRMNGENNHG
GHNRGRNRQKYNPLVRVDSVNGMTVEEAKARPEFAKLTPLYPNQRLRLETEPKVLTTRVI
DLIMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRS
VKGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASG
RILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAE
LKLDRKISERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRRMLSALDNQQAIDLLIKQ
LKKTKSNGEFLMQVASSAPMAADAEED
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgactaatacagataacagcgcacagcgtaatctcgctgctctgcgtttgcccgaactg
cgcaaaattgccgcagaaatgggcctgaaaggtacgtccgccctgcgtaagggtgatcta
attgcggctattaacggtacctctgccgctcatccaacatctgtggccccctcggaagag
aacaaagcagatgcaccaaagaaggaacgtccagcacgtcgtcgtgcgactaagcacgtt
gcccaagatgccggttccgagccagcgccagtggtaacagaagttgctgcgcctgcagaa
cagaatcctgcgccaaaacaagaaaaagaagctccagctggtgagtccgagcgtcagcca
cgccgtcgtcgtgcagtaaagacgtctgtgaaaacaacgcaggaggaacccgctgaggtt
cgcgtagcagaagctactgacaaatcttctgaagagcagtctgctgaggcaggttctgag
gataaagataactaccactacgagtctcgttctgccgctcgacgtgcccgtcgtaaccgt
gctcgtcgtgagcagcgcgaatacaatcgccctggcactaaagatgagagcgaagcatct
cagccagaaaatgagaattctcgcaacgacgtcgcaccagaatcctctgaggtagcagac
aacagcaacgagcaagctcgttctgatcaagctgatcaatccaccaagtcggactctcac
gacaatggtcgtgaggacaaccgccgtggcaatcgacacgagcgtggggagcgtggcgat
cgtaacgatcgtggggaccgcaaccgtcgtaatcgtcgtaaccgtcgtggccgtgaccgc
gatgataaccgtgataatcgcgaaaataacaacaacgaaccacgtgaagatgaagtcttg
caaaatgttgcaggcatcttggacatcgtggacaacaatgttgctttcgtgcgtacctcc
ggttaccacgccggtgctgctgacgtctatgtgaacaaccagatgattcgccgcttggga
ttgcgttctggcgacgcaattgtgggccaagttcgtatgaatggcgaaaacaaccacggc
ggacacaaccgtggccgtaaccgccagaagtacaacccattggtacgcgttgattcagtc
aacggaatgacggtggaagaagcaaaggcacgccctgagtttgccaagctcaccccgttg
taccccaaccagcgtctgcgcctcgaaacggagcctaaggttttgactacccgtgtgatc
gatttgatcatgccgattggtaaaggtcagcgtgctttgatcgtgtctcctcctaaggct
ggtaagaccacgatcctgcaaaatatcgcaaacgctattgctaccaacaacccagagtgc
tacctcatggttgttttggtggatgagcgtccggaagaagttaccgatatgcagcgttct
gtgaagggcgaagttattgcatcgaccttcgaccgtccacctagtgagcacaccgctgtt
gcagagctcgctattgagcgtgcgaagcgccttgtggagcagggacaggatgttgtagta
ctcctagactccattacgcgtcttggccgtgcctacaacaacagctcacctgcatccggc
cgaattctctccggtggtgtggactccaacgcgttgtacccaccaaagcgtttccttggt
gcggctcgcaacatcgaaaatggtggatcgcttacgattatcgccacggccatggttgag
actggttctgccggcgacaccgtgatcttcgaggaattcaagggcaccggtaacgccgag
ctgaagctggatcgtaagatttctgagcgccgtgtattcccagctgtcgacgtcaaccca
tcgggtacccgtaaggatgagttgctgctggctccggaagaagctcgcattatgcacaaa
ctccgccgcatgctttctgctttggataatcagcaggctatcgatttgttgatcaagcag
ctcaagaagaccaagtctaatggtgaattcttgatgcaggtagcaagttctgcgccgatg
gctgcggatgctgaggaggactaa
DBGET
integrated database retrieval system
