Corynebacterium deserti: CDES_02940
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Entry
CDES_02940 CDS
T04068
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cdx
Corynebacterium deserti
Pathway
cdx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDES_02940 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdx03021
]
CDES_02940 (rpoA)
03400 DNA repair and recombination proteins [BR:
cdx03400
]
CDES_02940 (rpoA)
Enzymes [BR:
cdx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDES_02940 (rpoA)
Transcription machinery [BR:
cdx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDES_02940 (rpoA)
DNA repair and recombination proteins [BR:
cdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDES_02940 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ALC05041
UniProt:
A0A0M4CCN1
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All DBs
Position
587512..588528
Genome browser
AA seq
338 aa
AA seq
DB search
MLISQRPTITEEFVDNARSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTINGVKEDVSDIILNIKGLVLSSDSDEPVVMQLVKEGPGVVTAGDIQPPAGVEIHN
PDLHIATLNETAKIDIELIVERGRGYVPATVTATGGEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLVIDVETKNSITARDALASAGKTLVELFGLARELNTAAEGIEIGPSPQET
EYIAAYSMPIEDLDFSVRSYNCLKREDIHTVGELAERAESDLLDIRNFGQKSINEVKIKL
AGLGLTLKDAPEDFDPSTLEGYDAETGGYIDVEAEDSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcacagcgcccaaccattaccgaggaatttgtcgataacgcacgttccaag
ttcgtcatcgagccactggagccaggtttcggctacacccttggtaactccctgcgccgt
accctgctgtcatccatcccaggtgcagcagtaaccagcatcaagatcgatggtgtactc
cacgagttcaccaccatcaacggtgtgaaggaagatgtttctgacatcatcctcaacatc
aagggattggtcctgtcttctgattccgatgagccagttgttatgcagctggtcaaggaa
ggcccaggagttgttaccgctggtgacattcagccaccagcaggcgtggagatccacaac
ccggatctgcacatcgcaaccctgaacgagaccgccaagattgacattgagctcatcgtc
gagcgtggacgtggctacgtcccagcaacggttactgcaaccggtggagaaatcggccgt
attccagtcgatcagatctactccccagtactgaaggtcagctacaaggtcgaagctact
cgtgttgagcagcgcaccgactttgacaagctggtcatcgacgttgagaccaagaactct
attactgcacgtgacgccctggcgtcggcaggcaagaccctggttgagctgttcggcctc
gcacgcgagctgaacaccgcagccgaaggcatcgaaatcggaccatccccacaggagacc
gagtacatcgctgcctacagcatgccaatcgaggatctggacttctctgtccgttcctac
aactgcctcaagcgcgaagacatccacaccgtgggtgaactcgcagagcgcgctgagtcc
gatttgctggatatccgcaacttcggacagaagtcgatcaacgaggtcaagatcaagctt
gctggcctgggtctaaccctaaaggatgctcctgaagacttcgatccttcaacccttgaa
ggttatgacgccgagactggtggctacatcgatgtcgaggcggaagattccgagtaa
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