Corynebacterium deserti: CDES_05840
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Entry
CDES_05840 CDS
T04068
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cdx
Corynebacterium deserti
Pathway
cdx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDES_05840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdx03021
]
CDES_05840
03019 Messenger RNA biogenesis [BR:
cdx03019
]
CDES_05840
Transcription machinery [BR:
cdx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CDES_05840
Messenger RNA biogenesis [BR:
cdx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDES_05840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALC05598
UniProt:
A0A0M5IR05
LinkDB
All DBs
Position
1195652..1197970
Genome browser
AA seq
772 aa
AA seq
DB search
MTTTDNTAANQGELTTLRLPELRKIAADLGLKGTSALRKGDLISAITAARAGKPTAAAKK
TSPRKAAVSQEKAPVEQPQDAPAQTSTPDQAPSEPAAQDVPKAAPARRGRRRVTAPATTP
EPTEATADNAASSQNTQSELPVTAANTDEQAENKPENKAENQSGSQDDRFESRSAARRAR
RNRQRQIHREGDARAESTAEANSEGAAIPTAAGTVTESVQATNTVADTQDATPAVDAPAA
QDSTTDSDARDNNRRDRNDRNERGDRNERGNRRNNRDRRENNRDDRAADNADAQGNQRGP
SDQSADNAGDNDDRRSRNRNDRSDRDNRDNRDNRNDRNDDNDDRRGRRGRRNRRGRNDRN
DRDNRDNRDNRDNDGDNTQQEEQLQPVAGILDIVDNNVAFVRTTGYHAAPSDVFVSNQLI
RRMGLRSGDAIEGQVRMNHGGNNNNHGRNRQKYNNLVRVELVNGLPAEETRNRPEFGKLT
PLYPNQRLRLETDQKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAISTNNP
ECYLMVVLVDERPEEVTDMQRSVHGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDV
VVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAM
VETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLNPDEARIM
HKLRRILSALDNQQAIDLLIKQLKKTKSNAEFLMQVASSAPMASTEKEEEYS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccacagacaacaccgcagcgaatcagggtgaactgaccacccttcgactgccg
gaattgcgtaagattgctgctgaccttggtcttaaaggcacgtcggcattgcgcaaaggc
gatctgatcagcgccatcaccgcagcccgcgcaggaaaaccaaccgccgctgcaaagaag
acttcgcctcgaaaagctgcggtttctcaggagaaagcaccggtagagcaaccacaggat
gctcccgcacaaacttctactcctgatcaagcaccctctgagcctgcagctcaagatgtt
cctaaggctgctccagcccgtcgaggtcgtcgccgcgtaactgctccggcaaccactcca
gagccaactgaagctaccgcagacaacgccgcttcatctcagaacactcagagtgagctg
ccagttactgcagcgaacaccgatgagcaggcagagaacaagccagagaacaaggcagaa
aaccagtctggttctcaggacgatcgcttcgagtctcgttctgccgcacgtcgtgcacgc
aggaaccgccagcgccagatccaccgtgagggcgacgcccgcgctgagtcgactgctgaa
gcaaacagcgagggtgcagctattccaaccgctgcaggaaccgttactgaatctgtgcag
gcaactaacactgttgcagacacccaggatgcaactcctgcagtagacgcacctgcagcg
caggattccaccactgattctgatgcacgcgacaataaccgtcgtgaccggaatgatcgc
aacgagcgcggtgaccgtaacgagcgcggcaaccgacgcaacaaccgcgatcgtcgtgaa
aacaaccgcgatgaccgtgctgctgacaacgcagacgcacagggcaaccagcggggtccg
tctgatcagtcggctgacaacgctggtgataatgatgatcgtcgttcacgcaaccgcaac
gatcgcagtgaccgcgacaaccgcgacaaccgcgacaaccgcaacgaccgaaatgacgac
aacgatgatcgtcgcgggcgccgtggtcgccgcaaccgtcgtggccgcaatgatcgcaat
gatcgtgataacagggacaaccgcgacaaccgcgacaatgacggtgacaacactcagcag
gaagagcagctgcagccagtagccggcatcttggacatcgtggacaacaatgtcgcattt
gttcgcaccaccggttaccacgctgcaccttctgacgtcttcgtcagcaaccagctgatt
cgccgcatgggtcttcgctccggcgacgccattgagggccaggttcgcatgaaccacggt
ggcaacaacaataaccatggtcgcaaccgccagaagtacaacaacctcgtgcgcgttgag
ctagttaatggtttgcctgcagaagaaacccgcaaccgcccagagttcggcaagctcacc
ccgctatacccgaaccagcgcctgcgtttggaaactgaccagaagatcctcaccacccgt
gtgatcgacttgatcatgccaatcggtaaaggccagcgtgcactcatcgtgtctcctcca
aaggccggtaagaccacgattctgcaaaacattgccaacgctatttccaccaacaaccct
gagtgctacctcatggtcgtcctggttgatgagcgtccggaagaagtcaccgatatgcag
cgttctgtgcatggcgaagtgatcgcatccaccttcgaccgtccaccatcagagcacacc
gctgttgctgaactggcaattgagcgcgcaaagcgcctggtagagcagggtcaggacgtt
gttgttctgctcgactccatcactcgtttgggtcgtgcttacaacaacagctcgcctgca
tcaggccgtattctttccggtggtgtggactccaatgctttgtacccaccaaagcgtttc
ctgggtgctgcccgcaacatcgaaaatggtggatcgctgacgatcatcgccaccgccatg
gttgagactggttctgccggcgacaccgtgatcttcgaagagttcaagggcactggtaac
gctgagctgaagctagatcgtaagatctctgagcgtcgcgtgttcccagcagtcgatgtc
aatccttccggtacccgtaaggatgagctgttgctcaaccctgatgaggctcgcattatg
cacaagcttcgtcgtattctttctgcacttgataaccagcaggcaatcgatcttctgatc
aagcagctgaagaagaccaagtccaacgcggaattcctcatgcaagttgcttccagcgca
ccgatggccagcactgaaaaagaggaggagtactcctaa
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