Entry |
|
Symbol |
uvrA
|
Name |
(GenBank) UvrABC system protein A
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
cdx Corynebacterium deserti
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cdx00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDES_06675 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cdx03400]
CDES_06675 (uvrA)
DNA repair and recombination proteins [BR:cdx03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDES_06675 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CDES_06675 (uvrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1374410..1377259
|
AA seq |
949 aa
MADRLVVRGAREHNLKGVDIDLPRDSMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDLIDGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH
CPVCDAPVERQTPQQMVDQILEMEEGLKFQILAPVVRTRKGEFVDLFADLASQGYSRVRV
DGEVHQLSDPPKLEKQIKHDIDVVVDRLQVKASQKQRLTDSLETSLRLADGVAVLEFVSL
DEDDPKRLRRFSEKMSCPNGHALSVDELEPRAFSFNSPYGACPTCDGLGVRTEVDIDLII
PDPDAPVTKAVQPWNSSPNSSYFEKLIEGLAKALDFDPDTPYSALTAAQKKALIYGSEKE
VSVRYKNRYGRIRSWTAPFEGVMGYFDRKLEQTDSESQKDRLLGYTREVPCPSCKGARLK
PEILAVRLDSGSHGALSIAGLTALSVHEAFEFLDNLTLGKREEMIAGAVLKEIHARLKFL
LDVGLSYLTLDRAAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLIAT
LEQLRDIGNTLIVVEHDEDTIRRADWLVDIGPRAGEYGGEVVYQGEPNGILDCEESLTGA
YLSGRRTLGVPDQRREIDPARQLTVVGARENNLRGIDVDIPLGVLCCITGVSGSGKSTLI
NQILAKVLANKLNRARQVPGRAKRVEGLEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKV
RNLFAETTEAKVRGYKPGRFSFNMKGGRCEACHGDGTLKIEMNFLPDVYVPCEVCEGRRY
NRETLEVKYKGKNIAEVLDMPISEAADFFEPITSIHRYLATLVDVGLGYVRLGQAATTLS
GGEAQRVKLASELQKRSNGRTIYILDEPTTGLHFEDIRKLMMVIQGLVDKGNSVVIIEHN
LDVIKAADWIVDMGPEGGSGGGTVVAEGTPEQVAEVKGSYTGQFLKELL |
NT seq |
2850 nt +upstreamnt +downstreamnt
ttggctgatcgccttgtagttcgcggtgcgcgggaacacaacctgaagggcgtggacatt
gacctgccacgtgattcaatggtggttttcaccggcttgtctggatcaggcaagtcttct
ttggcgtttgacaccattttcgccgaaggccagcgccgttatgtggaatctctgtcatcc
tatgcccgtatgttcttggggcaaatggataagccggacgttgatctgatcgacggcttg
tcgcctgcggtctcgattgaccaaaagtccaccaaccgcaatcctcgttccaccgtgggc
actatcacggaagtgtatgactacctgcgccttttgtatgcccgtgccggtacagcacat
tgccctgtgtgtgatgctcctgtggagcgtcaaactccacagcagatggtggatcagatt
cttgagatggaggaggggctgaagttccagatccttgctcctgtggtgcgcacccgaaaa
ggtgagtttgttgatcttttcgcagaccttgcctcacagggatattcccgcgtgcgcgtg
gacggtgaggttcaccagctctctgatccacccaagctggaaaagcagatcaagcacgat
atcgatgttgtggtggaccgcttgcaggtaaaagcgagccaaaagcaacgtctgactgat
tccttggaaacttccctccgcctggcagatggagttgcggtgctggaatttgtcagcctg
gatgaagatgaccctaagaggttgcgtcgtttctctgagaagatgagctgccccaatggc
catgccttgagcgttgacgagctggagcctcgcgctttctccttcaactctccctatggc
gcctgcccaacctgtgacggtcttggcgtacgcactgaggtggatattgacctcattatc
cctgaccctgatgcacctgtgaccaaggctgtgcagccgtggaactccagccctaacagc
tcctactttgaaaaacttatagaaggtctagctaaggcactggactttgatcctgatact
ccttatagtgcgctaactgctgcacagaagaaggccctgatctacggatctgaaaaggag
gtcagcgtccggtacaaaaaccgctacggcaggattcgctcctggacagctccatttgaa
ggcgtcatgggctactttgaccgcaagctggagcaaaccgattccgaatcccagaaggat
cgtctgctgggttacacccgcgaagtaccatgcccaagctgtaaaggtgcacgcctcaag
ccagagatccttgctgtccgtttggattccggctcccacggcgcactgtcgattgcaggt
ctcaccgcattgtcagttcacgaggcttttgaattcctggataatctcaccttgggcaag
cgtgaagaaatgattgcgggcgcggtgttgaaggaaattcatgcacgccttaagttccta
cttgatgtcggcttgtcgtatctgaccttggatcgtgcagcaggcaccctgtctggtggg
gaagcccagcgcatccgccttgctacccagatcggatctggccttgctggcgtcttatac
gtgttggatgagccatctattggcctgcatcaacgtgacaatcagcgattgatcgccacc
ctggaacaactccgcgatatcggcaacaccctcatcgttgttgaacatgatgaagacacc
attagacgtgccgattggctcgtggacattggaccacgagccggcgaatacggtggcgaa
gtggtttaccagggagaacctaatggaatccttgactgcgaggaatccctaaccggtgcc
tacctgtctgggcgacgaaccctcggcgttcccgatcagcgtcgcgagattgatccagca
cgtcaactcaccgttgtgggcgctcgggagaacaacctccgaggcattgacgtcgacatt
ccgctcggtgtgctgtgttgcatcaccggtgtctccggctctggcaaatccacgctgatc
aaccagattctggcaaaggtcctggccaacaaactcaaccgtgcacgccaggttcctggt
cgcgcaaagcgagtagaaggccttgagcacctggataaattggttcaggtcgatcaatca
ccgattggtcgcaccccacgatccaacccggccacctacacgggtgtctttgacaaggta
cgcaatctttttgccgaaaccaccgaagcaaaagttcgtggatacaagccaggccgattc
tccttcaatatgaagggcggacggtgcgaagcctgccacggtgacggcaccctcaagatc
gagatgaacttcctgccagacgtctacgttccgtgtgaggtctgcgagggcaggcgttac
aaccgcgaaaccctggaagtaaaatacaagggcaagaacatcgcagaagtattggacatg
ccgatctctgaggctgctgatttcttcgagccgatcacttcgattcaccgttacctagca
acgctggtggatgtgggccttggatacgtgcgcctcggtcaagcggctaccaccttgtcc
ggtggtgaagctcagcgcgtgaagctcgcgtctgaacttcaaaagcgctccaacggtcgc
accatctacatcttggacgagcccaccaccggcctgcactttgaagacatccgcaagctc
atgatggtgatccaggggctcgtggataagggaaactccgttgttatcattgaacacaac
cttgacgtgatcaaggcagctgactggattgttgatatgggtcctgaaggtggttccggt
ggtggcactgtggttgccgagggcaccccggagcaggtcgccgaggtgaagggctcctac
accggtcagttcctcaaagagctgctctaa |