Corynebacterium deserti: CDES_08845
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Entry
CDES_08845 CDS
T04068
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cdx
Corynebacterium deserti
Pathway
cdx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDES_08845 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdx03019
]
CDES_08845 (pnp)
03016 Transfer RNA biogenesis [BR:
cdx03016
]
CDES_08845 (pnp)
Enzymes [BR:
cdx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDES_08845 (pnp)
Messenger RNA biogenesis [BR:
cdx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDES_08845 (pnp)
Transfer RNA biogenesis [BR:
cdx03016
]
Prokaryotic type
tRNA degradation factors
CDES_08845 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
aRib
CagA
S1_RRP5
Flagellin_IN
Motif
Other DBs
NCBI-ProteinID:
ALC06161
UniProt:
A0A0M5IR96
LinkDB
All DBs
Position
complement(1809294..1811555)
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AA seq
753 aa
AA seq
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MSDVKYFEDTEFGLIEAVATIDNGDFGTRTIRFETGQLARQADGAVTTYLDDETMLLATT
TASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLRPTFV
KGLRNEVQIVVTVMSMNPEDFYDVVAINGASAATRISGLPVSGAVGGVRMALVVDEKHPE
GQWVAFPTHAQHQQSVFEIVVAGRLVERKRGNKTFSDVAVMMVEAGASENVVNRVAEGAP
APTEKIVSEGLEAAKPFIDILCRAQEGLAQRVGKATKEFPLFPAYTDEVFTAVERKVSKK
LGKLLTIKGKQERDDATNAYMEEIEAELLPKFEANYDSEAEASKEIRAAYNAVMKAIVRR
MILTDHFRIDGRGITDIRDLAVEVELVPRAHGSSLFERGETQILGVTTLDMLKMEQQIDS
LAPGDAKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERAVLPVIPSREEFPYAIRQ
VSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSGDIDGKTEYVALTDILG
AEDAFGDMDFKVAGTADFITALQLDTKLDGIPSKVLSDALEQARDARITILNTMADVING
PDEMSKFAPRITTVKIPVSKIGELIGPKGKNINALTEETGANISIEDDGTVFISAADGAS
AEAAIEKINALANPQLPKVGERFLGSVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRVEK
VDDVVKVGEKIQVEIADIDNRGKISLVPVVEED
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgtaaagtacttcgaagacaccgaatttggcctgattgaggccgtcgcaacc
attgacaatggtgacttcggaacccgcaccatccgttttgaaaccggccaactagcccgc
caggctgatggtgcagtgaccacctacctcgacgatgagaccatgctgctggctaccacc
actgcatcaaaccagccacgtgagggcttcgacttcttcccactcaccgttgacgtcgaa
gagcgtatgtacgctgcaggtcgcatccccggctcattcttccgccgtgagggacgccca
tctaccgaggcgattcttgcctgccgtttgattgaccgcccattgcgcccaactttcgtt
aagggtctgcgcaatgaagttcagatcgtggtcaccgtcatgtccatgaaccctgaggac
ttctacgacgtcgtcgctatcaatggtgcatccgcagcaacccgtatctctggtcttcca
gtatccggcgctgtcggtggcgttcgcatggcactcgttgttgatgagaagcacccagaa
ggccagtgggttgctttcccaactcacgcacaacaccaacaatccgtctttgagatcgtt
gttgctggtcgcctggtcgagcgaaagcgcggaaacaagactttctctgacgttgccgtc
atgatggtggaagctggcgcttctgagaacgtcgtgaaccgcgttgccgaaggtgctcca
gcacctacagaaaagatcgtgtctgaaggtctcgaagccgctaagccattcatcgacatc
ctgtgccgcgcacaggaaggtctcgcgcagcgcgttggcaaggcaaccaaggaattcccg
ctcttccctgcatacaccgatgaggtgttcaccgctgttgagcgcaaggtgtccaagaag
ctgggcaagctgctcacgatcaagggcaagcaagagcgtgacgacgccaccaatgcctac
atggaagagattgaagcagaactccttcctaagttcgaagccaactacgactccgaggca
gaggcatccaaggaaattcgtgcagcatacaacgctgtcatgaaggctattgtccgacgc
atgatcctcaccgatcacttccgcatcgacggccgtggcatcactgacatccgcgatctg
gcagttgaagttgagctcgttccacgtgcacacggatcctccctgttcgaacgtggcgag
acccagatcctcggtgtcacaaccttggatatgctcaagatggaacagcaaattgactcc
ctggcaccaggtgatgcaaagcgctacatccaccactacaacttccctccatactccacc
ggtgaaaccggtcgcgttggatcaccaaagcgccgcgaaatcggccacggtgcactcgca
gagcgcgcagttttgccagtgatcccatcccgcgaagagttcccatacgccatccgtcag
gtctctgaggcactgggttccaacggctccacctccatgggttctgtctgtgcatccacc
ttgtccctgtacaacgctggtgtgccactgaaggctccagttgcaggtattgccatggga
cttgtctccggtgacattgatggcaagaccgagtacgttgcacttaccgacatcctcggt
gcagaagatgccttcggcgacatggacttcaaggttgccggcaccgcggacttcatcacc
gcactgcagctggacaccaaacttgatggtatcccatccaaggtgctgtccgacgccctt
gagcaggctcgcgatgcccgaatcaccatcctgaacaccatggctgatgtcattaacggt
ccagatgagatgagcaagtttgcgcctcgaatcaccaccgtgaagatccctgtctccaag
atcggtgaactcatcggacctaagggcaagaacatcaatgcccttaccgaggagaccggc
gcaaacatctccattgaagatgacggcaccgtgttcatctctgcagctgatggtgcatcc
gctgaggctgcgatcgaaaagatcaacgcactggctaacccacagttgcctaaggttggc
gagcgattccttggatccgttgtcaagaccactgcattcggcgccttcgtctccttgcta
ccaggtcgcgacggcttggttcacatctctaagctgggcaacggcaagcgcgtggaaaag
gtcgacgacgttgttaaggtcggagagaagatccaggtcgaaattgctgatatcgacaac
cgtggcaagatttcccttgtcccagtagtcgaagaggactag
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