Corynebacterium deserti: CDES_08865
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Entry
CDES_08865 CDS
T04068
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdx
Corynebacterium deserti
Brite
KEGG Orthology (KO) [BR:
cdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdx03016
]
CDES_08865 (truB)
Enzymes [BR:
cdx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDES_08865 (truB)
Transfer RNA biogenesis [BR:
cdx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDES_08865 (truB)
Prokaryotic type
CDES_08865 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALC06165
UniProt:
A0A0M4CGM8
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All DBs
Position
1814236..1815135
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AA seq
299 aa
AA seq
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MDMNAPAPKSGLVIVDKPAGMTSHDVVSKLRRAFSTRKVGHAGTLDPMATGVLVVGIERG
TRFLAHMVASTKAYEATIRLGQATTTDDAEGSVLSTAVASGLSVPDVDAEIAKLTGDIMQ
KPTKVSAIKIDGKRAHERVRDGEDIDIPARPVTVTTFDVLDRRIDGDFLDLNVRVSCSSG
TYIRALARDLGAELGVGGHLTALRRTEVGPFTLDDATPLSSLQDDPHLSLSLDESLTRCY
PTMDITEEEGIDLSMGKWLEPRGLKGIHAAVTPSGKAVALIEEKGKRLATVFVAHPNTL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaacgctcccgccccaaaatctggactcgtcatcgtagacaagcccgccggc
atgacctcacacgatgttgtctccaaacttcgtcgtgcattttccacccgcaaagtcggt
catgctggcacgcttgaccccatggcaacaggagtgcttgtcgttggcattgaacgcggc
actcggttcctcgcgcacatggtcgcctccacgaaggcctacgaggcaacgattcgtttg
gggcaggccaccaccacggacgatgctgaaggttcagtgttgtccactgcggttgcatcc
gggctttcggtgcctgacgtggatgcagaaatcgctaagctcaccggcgacatcatgcaa
aaacccaccaaagtctccgccatcaaaatcgacggcaagcgcgcccacgaacgcgtccgt
gacggcgaggacatcgatatcccagcccgcccggtcaccgtgactacctttgacgtactg
gaccgccgcatagatggcgatttcctcgacctcaatgtccgagtatcctgctcttccggc
acctacatcagagcactcgcccgcgacctcggcgccgaattaggagtcggcggacacctc
acagcgcttcgccgcaccgaagtcgggccttttacgcttgacgacgccacccctctttcc
tccctccaggacgatccccacctgtctctttccctcgacgagtccctcacccgctgctat
cccacgatggacattaccgaagaagaaggcatcgacctctccatgggtaaatggctggaa
ccccgtggtctcaaaggcatccacgcagctgtcaccccctctggaaaagcagtcgcactc
atcgaagaaaagggaaagcgtctagcgaccgtgttcgtcgcgcatcccaatacgttgtag
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