Corynebacterium deserti: CDES_09610
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Entry
CDES_09610 CDS
T04068
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cdx
Corynebacterium deserti
Pathway
cdx03030
DNA replication
cdx03430
Mismatch repair
cdx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDES_09610 (dnaE1)
03430 Mismatch repair
CDES_09610 (dnaE1)
03440 Homologous recombination
CDES_09610 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdx03032
]
CDES_09610 (dnaE1)
03400 DNA repair and recombination proteins [BR:
cdx03400
]
CDES_09610 (dnaE1)
Enzymes [BR:
cdx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDES_09610 (dnaE1)
DNA replication proteins [BR:
cdx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDES_09610 (dnaE1)
DNA repair and recombination proteins [BR:
cdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDES_09610 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALC06307
UniProt:
A0A0M4CYT1
LinkDB
All DBs
Position
complement(1973087..1976653)
Genome browser
AA seq
1188 aa
AA seq
DB search
MAKNSSFVHLHNHTEFSMLDGMAKIDMLADEVKNQGMPAVGITDHGNMYGSNPFYRKMTE
MGVKPIIGIEAYLAPESRFNKERVRWGEPHQKSDDVSASGAYLHQTMLAENATGLRNLFY
LSSMASYEGQLGKWPRMDAEIIAERAEGIIATTGCPSGDVQTRLRLGQFDEALEAAAMWQ
DIYGRDNYFLELMDHGLDIETRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLC
VQTGKTLHDEDRFKFGGTGYYVKSAEEMRALWDDMVPEGCDNTLWIAERVQDYGEIWEEH
PHDRMPIADVPEGHTPTSWLHHEVMAGLEDRFPGQKVPEDYIERAEYEISVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQALKDSARVQMGQPGYQIADR
VIKDLPPAIMAKDIPLSGITDPEHPRYNEAGAVRQLIETDPDVKRIYDTARGLEGVVRQS
GVHACAVIMSSVPLLDCIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDA
IENIKANRNGEELDLENLAIEDEETYKLLGRGETLGVFQLDGGGMQELLKRMQPTGFNDI
VAALALYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEALEEILGETYGLIVYQEQIMR
ISQKVANYTAGQADGFRKAMGKKKPEVLEKEFANFEAGMKANGYSDAAIKTLWDTILPFA
GYAFNKSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKSAIYLADCRHLGIRVL
SPDINESTLNFLPVGTDIRYGLGAIRNVGSEVVDSILETRKEKGLFKDFSDYLDKIDTLP
CNKRITESLIKAGAFDSLGHPRKGLMLVFEDAVDSVIATKKAADKGQFDLFAAFGSEDTE
EVGSFFHITVPDEEWDRKHELALEREMLGLYVSGHPLDGYEDAIAAQVDTQLTTIVAGEL
KHGAEVTVGGIISSVDRRFSKKDGSPWAIVTIEDHNGASVELLVFNKVYSIVGSMIVEDN
IILAKAHISIREDRMSLFCDDLRVPELGPGNGQGLPLRLSMRTDQCTMSNIAKLKQVLVD
NKGESDVYLNLIDGDNSTVMILGDHLRVNRSASLMGDLKATMGPGILG
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaactcctcatttgtacatcttcacaaccacaccgagttttcaatgctcgat
ggaatggccaagatcgatatgttggccgatgaggtgaaaaaccaaggcatgcctgccgtc
ggcattaccgaccacggcaacatgtacggatccaatcctttctaccgaaaaatgaccgaa
atgggtgtcaagcccatcatcggtattgaggcgtatctggcaccggagtctcgctttaac
aaagagcgagtgcgctggggtgaaccacaccaaaaatcagacgacgtctccgcatccggc
gcttacctgcaccaaacgatgctggcggaaaacgccacgggtttgcgcaacctgttctac
ttgtcctcgatggcatcctatgaggggcaactaggtaagtggccacgcatggacgcagaa
atcatcgctgagcgcgctgaaggcatcatcgccaccaccggctgcccctctggcgatgtt
caaacgcgcctgcgccttggacaattcgatgaggctttggaagctgccgccatgtggcaa
gacatctacggccgcgataactacttccttgagctcatggatcatggcctcgacattgaa
acccgagtgcgcagcgagctgttggaaattggccgcaagctcaacctgcctccgctggtg
accaacgattgccactatgtccttgaatcgcaggcccaagcccacgaagcaatgctctgc
gtgcaaacaggaaaaacgcttcacgacgaagaccgcttcaaattcggtggcaccggctat
tatgtgaaatcagccgaagaaatgcgtgcactgtgggacgatatggttcccgagggctgc
gacaacaccctatggatcgccgagcgtgtccaagactatggcgagatctgggaagagcac
ccccacgaccgcatgcccatcgctgacgttccagaaggtcacaccccaacttcgtggctt
caccacgaagtgatggccggtcttgaagatcgcttcccaggacaaaaggtcccagaagac
tacattgagcgcgcggagtatgagatctccgttattgacatgaagggttacccttcctac
ttccttatcgtcgccgagctcatcaagcatgcccgttccatcggcatccgtgttggtcct
ggccgtggttctgcagcaggcgcattggtggcctacgccttaacgattaccaacatcgac
ccgatggaacacggtcttctgtttgagcgcttcctcaaccctgaacgtccatccgcacct
gatatcgatatcgacttcgacgatcgccgccgcggtgaaatgatccgctacgcagccgat
cgctggggcgaagacaagattgcccaggtgatcaccttcggtacggtgaaaaccaagcag
gcgctgaaagactctgcccgcgtgcagatgggccagccgggttaccaaatcgctgaccgc
gtgatcaaagacttgccaccagccatcatggccaaagacattcctttgtcaggtatcacc
gatccagaacaccctcgctacaatgaagcaggtgctgtccgccagctgatcgaaactgac
cccgacgtcaagcgcatctacgacaccgcgcgtggccttgaaggcgtggtccgccaatct
ggtgtgcacgcctgcgccgtgattatgtcctcagtcccactactggactgtatccccatg
tggaagcgccctgccgacggcgccctcatcacaggctgggactacccagcgtgtgaagcc
atcggcctgttgaagatggacttcctgggtcttcgaaacctcaccgtcatcggtgacgcc
atcgaaaacattaaagccaaccgcaacggtgaagaacttgacctggaaaacctcgctatc
gaagatgaggagacatacaaactccttggccgtggtgaaacgcttggtgtgttccagctc
gatggcggtggcatgcaggaactacttaagcgcatgcagccaactggcttcaatgacatc
gtcgcagcgctcgcgctctaccgaccaggccccatgggtgtgaatgcacactgggactat
gcagaccgcaaaaacggtagaaagccaatcactcctatccacccagagcttgaagaagcg
ttggaagaaatccttggcgagacctacggcctgatcgtgtatcaggagcagatcatgagg
atctctcagaaggtggccaactacaccgcaggccaagcagatggtttccgtaaagctatg
ggtaagaaaaagcccgaagtgctggaaaaggagtttgccaacttcgaagccggaatgaag
gccaacggctactccgatgctgccatcaagacgctgtgggataccatcctgccgtttgca
ggatatgcgtttaacaaatcccacgcggctggttacggtttggtgtccttctggactgcc
tacctgaaggctcactatgcccctgagtacatggcggcactgctgacctctgtgggtgac
aacaaggataagtccgcgatttatcttgcagactgccgccacctaggcatcagggtgctg
tctccggacatcaacgaatccaccctcaacttccttcctgtgggcaccgacattcgctac
ggccttggtgctatccgcaacgttggttccgaagtggttgattccattttggaaacgcgt
aaagaaaaaggtttgttcaaggacttctctgactacttggacaagatcgataccttgcca
tgcaacaagcgcatcacggaatcgttgatcaaggcgggtgccttcgactcgttgggccat
cctcgaaaaggcctcatgctggtctttgaagacgccgtcgattccgttattgccaccaag
aaggccgccgataagggacaattcgacctatttgcagcctttggatccgaagacaccgaa
gaagtaggcagcttcttccatatcaccgtgcctgacgaggaatgggatcgtaaacacgaa
ctcgccctggaacgcgaaatgttgggactttacgtttctggccacccactggacggttat
gaagacgccatcgccgcgcaggtggatacccagctgaccacaatagttgccggtgaactc
aagcatggggcagaagtcaccgtcggtggcattatttccagcgttgaccgcagattctcc
aaaaaggacggctcgccatgggcgatcgtcaccattgaagatcacaacggtgcatccgtg
gaactgctcgtgtttaacaaggtgtattccatcgtcggatccatgattgtggaagacaac
atcatcctggccaaggcacatatctccatccgagaagaccgcatgagcttgttctgtgac
gatctgcgcgtgcctgaacttggtcccggcaacggccaaggcctgccactgcgtctctct
atgcgtaccgatcagtgcaccatgtcgaatatcgccaagcttaagcaggtgctggtggac
aacaagggtgaatcagatgtgtatctcaacctcattgatggtgataattcaaccgtcatg
atcttgggtgatcacctccgcgtcaataggtcagcaagcttgatgggtgatcttaaggcc
accatggggccgggaattctcggctaa
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