Clostridium diolis: F3K33_00110
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Entry
F3K33_00110 CDS
T06237
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cdy
Clostridium diolis
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_00110 (addB)
Enzymes [BR:
cdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F3K33_00110 (addB)
DNA repair and recombination proteins [BR:
cdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
F3K33_00110 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QES71316
LinkDB
All DBs
Position
19191..22670
Genome browser
AA seq
1159 aa
AA seq
DB search
MSIRFVYGRSGTGKSKFCIDEIKNNIDKKLDLNKLILLVPEQYTFTTENKILHEIGEHAF
FRTEVLSFKKMAHNIFEEYGGRVKEIIKESGRNMLIHRVINENIESLDYFNRMSREQGFN
EIISEVISEFKKYNISIDSIRAIDEKINDNELYQKIKELMIIYEAFNLKMHENYIDGDDQ
LTLLNKKLLESSAYVDSEVWIDEFTSFTPQQLDIIKVLAKRCRRVNITFCIDNKSLNNNS
EDITDVFNIIKSTENKILKIMKENNIAYDKPVNLNNAIPYRFKDNLELDHIEKYFFSYPF
NEYDKTPERITLYKASNIYDEIERVSKSITSLVREKGYRYRDISVVCRNIDDYEKIISVI
FKDYNIPYFLDKKIQLLSNPLIVLISSAFEILLKNWSYESVFKYLKSGLTGIDNSYIDRL
ENFILEYGVKGYKWTSRETVNEKWFIGNSELTDDKVLIAEIMEEIRYPLMIFHNKINGKH
KVKDICSAIYEFLVDVKVFDRINEWIKNFEELGLEDKVKEYSQVESIVIDILDQAVDVIG
EERLEYSEFFRILSSGFANEEIGIIPVALDQVNIGDIARIKGRDVKVLYIVGINDGVLPA
SKKEEGLLSDRDRITLGEVGINLSSTTRNKVFEEQYLLYIALTISSEYLMLSYPMADFEG
KSLRPSIVISRIKKIFPNLIEESAIYDLKILENKFGKIIAPIPTFNELIISMRKDFDKEY
IEPHWSEVYEWFKNNGEFKDKVKNIFKGLSYSNIGDKVPRNKLRKLYQNDLEKLVFSVSK
LEKYAECPFSYFVQYGLKAKNRKVYEFTPPDLGSFVHEMLDSFTNKVREDGILWSDLSNE
KCKKIISNLIDKKLMDESNSILNSTKKFKYLAQRFKRVISKSVSVIASQIGKGEFEVFKT
EFDFGSYSSGEAITLDLSDNEKVYLQGRIDRIDKLDLDGETYIRIIDYKTGAKKFDLNEI
YHGLQMQLLVYLDALIRNSKYILDKQVKPGAILYFKIDDPIIKSKKEMTDEEVEKEVLSA
LKMKGLVLKDARVVKAMDKDIEGYSLVIPASFKADGSFKATSDVVTEEEFRILREYVNRK
MIEICEEMLSGDIKIQPTKNSNIAHCEYCDFSSICQFDTEIKDNKYKIIINKSTNDIWNN
IKKEIDNSNKLIKVENEEV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagatttgtttatggaagatctggaacaggcaagagtaaattttgcattgac
gagataaaaaataatattgataagaaattagatttaaataagttaattctattagttcca
gaacaatatacatttacgaccgaaaataaaatattacatgaaataggagaacatgctttt
tttaggacagaggtgctgagttttaagaaaatggctcataatatttttgaagaatatggt
ggaagagttaaagagattattaaggaatctggaaggaatatgctaattcatagagttata
aatgaaaatattgagtctttggattattttaataggatgtctagagaacaaggatttaat
gaaattatatcagaagtgatttcggaatttaaaaagtataatattagcattgatagtata
agagcaatagatgagaaaataaatgataatgaattatatcaaaaaattaaagagttgatg
ataatttatgaagcatttaacttaaaaatgcatgaaaattacattgatggagatgatcag
ttaacattactaaataaaaagttattagaaagtagcgcgtatgtagattctgaagtctgg
atagatgaatttactagctttacacctcaacaactagatattataaaggtattagccaag
agatgcagaagagttaatataactttttgtattgataacaaatctctaaacaacaactct
gaagatataactgatgtattcaatattataaagagtactgaaaataaaatattaaagata
atgaaagaaaacaatatagcctatgataagccagttaacttaaataatgcaattccttat
aggtttaaagataatctggaacttgatcatatagaaaagtattttttttcttacccattt
aatgaatatgataagacccctgagagaataacactttacaaagcaagtaatatttatgac
gagatagaaagagtatcaaaaagtattacaagtttggtgagagaaaagggttatagatat
agagatatatctgtagtttgtagaaatatagacgattatgaaaaaataatatcagtaata
tttaaagattataatattccatactttttagataaaaagattcaattactaagtaatcca
ttgattgtacttataagttctgcttttgaaattttgcttaagaattggtcttatgaaagt
gtatttaaatatttaaagagtggtttaactggcatagataattcatatatagataggcta
gagaactttatattagagtatggggtaaagggttataaatggacatcaagagaaacagta
aatgagaaatggtttataggaaatagtgaattgacggatgataaagttttaatagctgaa
attatggaagagataagatatccattgatgatttttcataataaaataaatggaaaacat
aaagttaaagatatatgttcagctatttatgagtttttagtggatgtaaaagtttttgac
agaattaatgaatggattaaaaattttgaagaattaggattagaagataaagttaaggaa
tatagtcaggttgaaagtatagttatagacattctagatcaagcggtcgatgttataggc
gaagagagattagagtattctgagttttttagaatattgagttctggtttcgccaatgaa
gagataggaattatacctgtagcattagatcaggttaatattggagatatagcaagaata
aagggcagagatgttaaagttctttacatagtaggaattaatgatggagttctaccggca
tccaagaaagaggaaggtctattatctgatagagatagaataacattaggtgaggttgga
ataaatttatcatcaacaactagaaataaagtttttgaagaacagtatctactatatata
gcattaacaattagtagtgaatatttaatgctttcatatccgatggctgattttgagggt
aaatcattaagaccatctatagtaatatctagaattaaaaagatatttcctaatttaatt
gaagaaagtgcaatttatgatttaaaaattcttgaaaataaatttggcaaaattattgca
ccaattccaacatttaatgaacttataatttctatgagaaaagattttgataaagaatat
atagagcctcactggtctgaggtatatgaatggtttaaaaataatggtgagtttaaagat
aaagttaagaatatatttaaggggcttagttactcaaacattggagataaagttccaaga
aacaagcttagaaaactttatcagaatgacttagaaaagttagtatttagtgtttcaaag
ttagaaaagtatgcagaatgccctttttcttattttgttcaatatgggctaaaggctaaa
aatagaaaagtatatgaatttacaccaccagacttaggatcatttgtacacgaaatgctt
gattcattcactaataaagttagagaagatggaatactatggtctgatttaagcaatgaa
aaatgtaagaagataatatctaaccttattgataagaagttaatggatgaaagtaattct
atattaaatagtactaagaaatttaaatatttagcgcaaaggttcaaaagagtaatatct
aaatctgtttcagttattgcaagtcaaatagggaaaggtgaatttgaagtatttaaaact
gaatttgattttggaagttatagctctggagaagctataacattagatttaagtgataat
gaaaaggtgtatcttcaaggaagaatcgatagaatagataaattagatttagatggcgaa
acttatataagaattatagattataaaactggagctaaaaaatttgacttaaatgaaata
tatcatggattacaaatgcaattattagtttacttagatgcacttataaggaattcaaaa
tatatacttgataaacaagtaaaaccaggagcaatattatactttaaaatagatgatcct
ataataaaaagcaaaaaagaaatgactgatgaagaagtagaaaaagaagtattaagtgct
ttaaagatgaaaggattagtcttaaaggatgcgagggttgtaaaagctatggataaggat
atagaaggatattcattggttataccagcatcatttaaggctgatggaagctttaaggca
actagtgatgttgtaacagaagaggagtttagaatacttagagaatatgtaaataggaag
atgatagagatatgtgaagaaatgctaagtggagatattaaaattcagcccactaagaat
tctaacattgctcattgtgaatactgtgatttttcatcaatatgccaatttgatacagag
ataaaagataataaatacaaaattataataaacaaatctacaaatgatatatggaataat
ataaaaaaagaaattgataattctaataaattaattaaagttgaaaatgaggaagtatag
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