Clostridium diolis: F3K33_01945
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Entry
F3K33_01945 CDS
T06237
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdy
Clostridium diolis
Pathway
cdy03420
Nucleotide excision repair
cdy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F3K33_01945 (pcrA)
03430 Mismatch repair
F3K33_01945 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_01945 (pcrA)
Enzymes [BR:
cdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F3K33_01945 (pcrA)
DNA repair and recombination proteins [BR:
cdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F3K33_01945 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
F3K33_01945 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
DUF5604
AAA_14
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QES71648
LinkDB
All DBs
Position
393032..395299
Genome browser
AA seq
755 aa
AA seq
DB search
MDLKSLLNKEQYEGATTIDGQVLILAGAGSGKTRVLTHRMAHMIEDLDIAPYSILAITFT
NKAAKEMKDRVKALIGERAENMWISTFHSTCVRILRREIDKIGYKSSFTIYDSSDQKTLV
KECMKTLNINDKDITEQEIMGKIGKAKDRMQSVRSFMLENEANFREKKIADVYEMYQKRL
KENNALDFDDLIFKTVELFKNNPEVLEFYQNKFKYIMVDEYQDTNGAQYELVKLLASKYK
NICVVGDDDQCIYQWRGADIQNILDFEKDYPGAKVIKLEQNYRSKGNILSAANVVIVNNA
NRKSKVLRTEQEPGNKIKIYRAYADSDEGDFVSKQILDIKNKEDKNYNDFAILYRTNAQS
RIFEESFRRKGVPYKIVGGTRFYDRKEIKDVLAYLKVIVNPQDDISIRRIINVPKRSIGD
ATVAKVQEFASSFEFDLWDALAEVRSIPTLTSRNVSTIEPFVALMENFMELSETVPVSVL
IESILKDTGYLKQLQESNEIEDKSRIENLKELVSDAADFEKNNEDKSLSAYLERVSLVQD
TDKIEEEDDAVVLMTIHSAKGLEFPVVFMVGMENGIFPGNASFEKESEMEESRRLCYVGI
TRAKQTLFMTSAEVRRVFGKTVAYPQSDFINEIKPDLKEYVGVKKESAKSREKLMQSNSY
TNPHSLRNSVTGNRAYTLNNGGINNVIDRSTMNEMAKEYISVSEATLGRKVIHEKFGKGT
IVAIQDSGNDKKLTVAFDKQGVKSLLLSFAKLKMI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaatcattacttaataaagaacaatatgaaggggcaactacaattgatggg
caggtgcttattttagctggagctggttcaggtaaaacaagagttttgacacatagaatg
gcacacatgattgaagatttagatattgcaccttatagtatattagctattacttttaca
aataaggcagcaaaggaaatgaaggatagagttaaggcacttattggtgaaagagcagaa
aatatgtggatatccactttccattcaacttgtgttaggatactaagaagagagatagat
aagataggctacaagagtagctttactatatacgatagctcagatcaaaagacattagtt
aaagagtgcatgaaaacacttaatattaatgataaagatataacagaacaagagataatg
gggaagataggaaaagctaaagatagaatgcaaagtgttagaagctttatgttagaaaat
gaagctaactttagggaaaagaaaattgcagatgtttatgaaatgtaccaaaagagatta
aaagaaaacaacgcgttggattttgatgatttaattttcaaaacagttgagcttttcaaa
aataaccctgaagtattggagttttaccaaaataaatttaaatatataatggttgatgag
tatcaggatactaatggcgctcaatatgagttggttaaattacttgcttcaaaatataag
aacatatgtgttgttggagatgacgatcagtgtatttaccagtggagaggcgcggatatt
caaaatatactagattttgaaaaagattatccgggagctaaagtaattaagctagaacaa
aattatagatcaaaaggaaatatactaagcgcagctaatgtggtaattgttaataatgca
aatagaaaaagcaaagtattaaggactgaacaagaaccaggaaataaaatcaaaatatat
agggcctatgctgatagtgatgaaggagattttgttagtaaacaaatcttagatataaag
aataaagaagataaaaattacaatgactttgctatactatacagaacaaatgctcagtcg
agaatttttgaagaaagttttagaaggaagggagtcccttataaaatagtaggaggcaca
agattctatgacagaaaagagataaaagatgtattagcatatttaaaagttattgttaat
cctcaagatgatattagcattagaagaataataaatgtacctaagaggagcattggtgat
gcaactgttgcaaaggttcaagaatttgcaagcagctttgagtttgatttatgggacgca
ttagctgaagtaaggagtattccaacattaacgtcaagaaatgtttcaacaattgaacct
tttgttgcgctcatggaaaatttcatggaactcagtgagacagtccctgtttcagtactt
attgaatcaatattaaaagatactggatatctaaaacaattacaggaatcaaatgaaatt
gaagacaagagtagaattgaaaatttaaaagagcttgtttcagatgcagctgattttgaa
aagaacaatgaagacaaatcgttatctgcttatttagagagagtttctctagttcaggat
acggataagattgaagaggaagatgatgcagtagtattaatgacaatccatagtgcaaag
gggttggagttccccgttgtatttatggttggtatggaaaatggtatttttccagggaat
gcgtcatttgaaaaagaatcagagatggaagagtcaagaagattatgttatgttggtata
actagagcaaaacagacattgtttatgacttcggcagaggttaggagagtatttggtaaa
acagtagcatatcctcaatctgactttattaatgaaataaagccagacttaaaagaatat
gttggagttaaaaaggaaagtgctaaaagcagggaaaagcttatgcaaagtaattcctac
actaatccacacagtttaagaaatagtgttacaggcaatagagcatatactcttaataat
ggcggtattaataatgtaattgatagaagtactatgaatgaaatggctaaagaatatata
tctgttagtgaagcaacccttggaagaaaagtaattcatgaaaagtttggaaaaggaaca
attgtggctatccaggattcaggtaacgataagaaattaacggttgcgttcgataaacaa
ggggttaagtcattattattatcttttgcaaaacttaaaatgatttag
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