Clostridium diolis: F3K33_02485
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Entry
F3K33_02485 CDS
T06237
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cdy
Clostridium diolis
Pathway
cdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F3K33_02485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_02485
Enzymes [BR:
cdy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F3K33_02485
DNA repair and recombination proteins [BR:
cdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F3K33_02485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
NAT10_TcmA_helicase
PhoH
AAA_22
DEAD
AAA
SLFN-g3_helicase
nSTAND3
AAA_28
HHH_2
AAA_23
NTPase_1
ATPase_2
DNA_pol_lambd_f
AAA_29
AAA_12
HTH_72
NPHP3_N
T2SSE
SRP54
SMC_N
cobW
ABC_tran
HHH_3
ABC_ATPase
MeaB
MobB
UvrD-helicase
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QES71725
LinkDB
All DBs
Position
488873..491101
Genome browser
AA seq
742 aa
AA seq
DB search
MEVLNGFVENIVFKSEDTGYVVCRIRNEKTLISAVGTVPFLREGQNVKLTGYWTVHKQFG
NQFNIQDYEELLPNSLDGIEKYLSAGIIHGIGPVTAKKIIERFGEETLDIMENHIERLME
IEGIGEKKFQIIYESYIEQQGLKDIILYFHKHGVTNNQCVKIYKKFGPNARQIVSDNPYI
LCDEISGIGFKTADRIAMSIGIEKNSEFRIQSGIKYVMNQFCSAGNTFMPKNNIIEECEN
NLLISKELIEKNIYDMAAQQKIIVENINGTEVGFLLQYYYCELGVTSKIITLGLQQIQTI
NSDVDFEINVFEKEQNIKFAESQREAIIGAFNNGIEIITGGPGTGKTTIIKAIIHIYENN
GMKVILGAPTGRAAKRMTESTGREAKTIHRLLEMGISEDDESVFEKGESSPLDCDVIIID
EASMIDIILMQNLLKAINLGTRLIIVGDVDQLPSVGPGNVLKDLIESDYIKVVRLKEIFR
QGSESLIVVNAHRINEGQMPLLNQKDRDFFFISEDNQERIANTIMDLINRRLPKFNKSWN
KLKDMQVLTPMRKGVLGVTNLNTKLQEMFNASSKDKKEKTSRDIIFREGDKVMQTKNNYT
LKWIRVSGYGENEGVGVFNGDLGFIESIDEERKTLTIIFDEERKVIYDFNFLDELDLAYA
TTIHKSQGSEFKVVIIPVFMGSPFLMNRNLLYTGITRAKQLVVVVGFQKALMYMINNTNS
IERYSSLRYRIREIITKDEFEE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaagttctaaatggatttgttgagaatattgtttttaaaagtgaagatactggttat
gtagtttgtagaattagaaacgaaaagacattaattagtgctgtaggaacagttcctttc
ttgagagaaggacaaaatgtaaagttaacaggatactggacagtacacaaacaatttggt
aatcaatttaatattcaggattatgaagaacttcttccaaattcattagatggcatagaa
aaatatttaagtgcaggaataatacatggaattggaccagttacggctaagaaaataata
gagagatttggtgaagaaactctagacataatggaaaaccatattgagaggcttatggag
atagagggtataggggaaaagaaatttcaaataatatatgaatcctatatagagcaacaa
ggtttaaaagatataatcttatattttcataaacatggagtcactaataatcagtgtgta
aaaatatataagaaatttggtccaaatgcgaggcagatagtatctgataatccatatata
ttatgcgatgaaatatcaggaattgggtttaaaacagctgacagaattgctatgagcatt
ggcattgaaaagaattcagagtttagaattcaaagtggcattaaatatgttatgaatcaa
ttttgctctgcaggaaacacatttatgcctaaaaataatataatagaagaatgcgaaaat
aatttgttaatatctaaggaattaattgaaaaaaatatatatgacatggctgcgcaacaa
aaaattattgttgaaaacataaacggtactgaagtcggatttttgcttcaatattattat
tgcgagctaggtgttactagtaaaataataactttaggtttgcagcaaattcagactata
aactcggatgttgatttcgaaattaacgtttttgaaaaggaacaaaatataaaatttgca
gaatcacaaagagaagcaattattggcgcatttaataatggtatagaaataattaccggt
gggccaggaacagggaagactacaattataaaggcaataatacatatatatgagaataat
ggaatgaaagtaatacttggggcaccaacaggaagagctgcaaagaggatgactgaatca
acagggagagaagctaaaacaatacatagactattagaaatgggaatttctgaggatgat
gaatcagtatttgaaaaaggagaatcatcgcctctagattgtgatgtaataataattgat
gaggcgtctatgattgacattatcttaatgcagaatctactaaaagcaattaatttagga
actaggttgataattgtgggagatgttgatcaattaccttctgttggaccaggaaatgtg
ctaaaagatcttatagaaagcgattatataaaggtggtaagattaaaagagatatttagg
caaggatcagaaagtttaattgtagtaaatgctcatagaataaatgagggacagatgcct
ttgctaaatcaaaaagatagagattttttctttattagcgaagataatcaagaaagaatt
gcaaatactataatggatctaataaatagaagactccctaagtttaataagtcttggaat
aaactgaaggatatgcaggttttaactcctatgagaaaaggtgtgcttggagtcacaaat
ttaaatacgaagcttcaagaaatgtttaatgcatcatcaaaagataaaaaggaaaagact
tctcgagatataattttcagagaaggtgataaggtaatgcaaacaaaaaacaattataca
ttaaagtggattagggttagtggttatggcgaaaatgaaggagtgggagtttttaatggt
gatctgggattcatagaaagcatcgatgaagaaagaaaaacactcacaatcatatttgat
gaagaaagaaaagttatatatgattttaattttttagatgagttggatttggcttatgct
actacaatacataaaagccaaggaagtgaatttaaggttgtaataattccggtatttatg
ggatcgccatttcttatgaatcgtaatttactttatacaggcattacgagggcaaaacaa
ttagtagtagttgttgggttccaaaaagcattaatgtatatgattaataatacaaatagt
atagaaagatactcatctttgagatatagaataagagagataataaccaaagatgaattc
gaagaataa
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