Clostridium diolis: F3K33_04475
Help
Entry
F3K33_04475 CDS
T06237
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cdy
Clostridium diolis
Pathway
cdy03030
DNA replication
cdy03430
Mismatch repair
cdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F3K33_04475 (holA)
03430 Mismatch repair
F3K33_04475 (holA)
03440 Homologous recombination
F3K33_04475 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdy03032
]
F3K33_04475 (holA)
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_04475 (holA)
Enzymes [BR:
cdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F3K33_04475 (holA)
DNA replication proteins [BR:
cdy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F3K33_04475 (holA)
DNA repair and recombination proteins [BR:
cdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F3K33_04475 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Syndetin_C
HP0268
Motif
Other DBs
NCBI-ProteinID:
QES72098
LinkDB
All DBs
Position
972920..973954
Genome browser
AA seq
344 aa
AA seq
DB search
MINYEVYEQEIEKGNIKNGYIFCGLDEEFIKDGISLIIKKNIAEEFMDLNLIRIDGMNTS
FDAIMNACETMPFMGEKKVVVVYRSNFLQDKTDSSGTKIYNDIKSYISNLPPYTVLIMYY
LLNDKRDRPNKNKKLATIGKSLTIVYCDKLKRDKYLKKVSEVFKEKGKQIGRTELSYFCE
KVYNNFDIIKREADKLISYCGEREIKKEDIDILISKSSEDDTFDLVELIATKKIDKAIDT
MKEILYKSDQHMLIISAIQKHFLRLYEIKIKLSNGKKVDDFMSDYRLPQFVCEKLIMQTN
KFTQKQLSELIKLCVNTETKLKSTGIDKNMEMEFLLINTLTVKK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgattaattacgaagtttatgagcaagagattgaaaaaggaaatataaaaaatggatat
atattttgtgggttagatgaagaatttattaaagatggaataagtctgattataaaaaag
aatatagctgaagaatttatggatcttaatttaataaggatagatggaatgaatacaagt
tttgatgctatcatgaatgcgtgtgaaacaatgccattcatgggagaaaaaaaagttgtg
gttgtttataggtctaattttttacaggacaaaactgattcgtcaggaactaaaatatac
aatgatattaagagctatatatcaaatttacctccatatacagtattaataatgtattat
ttattgaatgataagagagatagaccaaataaaaataagaaattagctactattggtaaa
tcattaacaatagtatattgtgataaattaaaaagggacaaatatttaaagaaagtatcg
gaagtatttaaagagaagggaaaacaaattggaagaactgagttatcttatttctgtgag
aaagtctataataattttgacattataaaaagagaagctgacaagcttatatcgtattgt
ggtgaaagagagataaaaaaagaggatattgatatacttatttcaaaatcaagtgaggat
gatacttttgatttagttgaattaatagctaccaaaaaaattgataaagctatagatact
atgaaggaaattttatataaatcagaccagcatatgctgataataagtgctattcaaaag
catttcttgagattatatgagataaagataaaacttagcaatggaaaaaaagtagatgat
tttatgtcagactataggttgccgcagtttgtttgtgaaaaattaataatgcagacaaat
aaattcacacaaaagcagttatcagagttaattaagctttgcgttaatacagaaacaaag
ttaaaatcaactggaatagataagaatatggaaatggaattccttttaataaatacactt
acagttaaaaaataa
DBGET
integrated database retrieval system
