Clostridium diolis: F3K33_06170
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Entry
F3K33_06170 CDS
T06237
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cdy
Clostridium diolis
Pathway
cdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F3K33_06170 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_06170 (priA)
Enzymes [BR:
cdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F3K33_06170 (priA)
DNA repair and recombination proteins [BR:
cdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F3K33_06170 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
Zn_Ribbon_YjdM
AAA_30
SLFN-g3_helicase
T2SSE
TrwB_AAD_bind
Zn_Ribbon_TF
zf-CHY
Viral_helicase1
DUF87
PIF1
DUF1258
Motif
Other DBs
NCBI-ProteinID:
QES76133
LinkDB
All DBs
Position
1359458..1361656
Genome browser
AA seq
732 aa
AA seq
DB search
MYAEIIINSDALEIDKPFTYKVPSELQDKIGIGFRVKVPFGPKSRPIEGFVFSILQEDDL
INFNYRVKEILNICDDHAILTNYDMEVIKFLRRKYLCKFIDAIRLMIPVGIMKGLREKKK
KVVLVNEEIHEDQLDKENYKKLYDFVASNNGIYTKTEIVSNGCFSLYLLNKLIEKGILKT
EEQTVFRYNTRIYDTDSNKKLTREQENCLNTILNSPDQKYLIKGVTGSGKTEVYIRLVEE
MLRQNKSTIVLVPEISLTPQMIERFKGRFGENVALFHSRLSDGERFDEWYRVKEGKAKLV
IGARSALFLPLQNLGLIIIDEEHENTYKSEHNPKYHTREVSEFICEIKDCKLVMGSATPS
IESYYKAIRGEYKLIEMHKRTNGKEMPHMEIVDMREELKSKNLSLFSRKLLAEIEATLKD
KKQVILFLNRRGYSTFISCRSCGYVFKCPECDVSMTYHKNGYLICHYCGRAEKSKTVCPK
CNSKYVKFFGAGTERVELEVKKYFPKSRVLRMDVDTTRHKNSHESIYNCFKNGEADILIG
TQMVSKGLDFKNVTLVGVLAADMSLNLPDYRASERTYQIITQVAGRSGRGEDEGKVIVQS
YTPNHYSLKCAQEEDYESLFKEEIKIRRLMENPPFGKILLIVGSSKFEEKLTKFMYTLEA
DLKKLVVDDLTILGPVPCIISKLKENYRWQIIIKGNFDDEFSEKVKDTLYLLNKSVYNEI
RVSIDINPNNMT
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctgaaataattataaatagtgatgctttggagattgataagccatttacatac
aaagtacctagcgaacttcaggataaaataggaataggatttagagttaaagtgcctttt
gggcctaaaagcagaccaatagaaggctttgtattttcaatattgcaggaagatgattta
attaatttcaattatagagtgaaagagattttaaatatatgcgatgatcatgctatatta
acaaactatgatatggaagtaattaaatttttaagaagaaagtatttatgtaaatttatt
gatgcaatccgacttatgattccagttggaattatgaaggggttaagggaaaaaaagaaa
aaagtagttttagtaaatgaagaaatacatgaagatcagcttgataaagaaaattataaa
aaattatatgatttcgtagctagcaacaatgggatttatacaaaaacagaaattgttagt
aatggatgcttttctttatatttattaaataagttaatagaaaaaggtatactaaaaaca
gaagaacaaacagtatttagatacaatactcgaatatatgatactgatagtaataagaaa
cttacaagagaacaggaaaactgtcttaatacgattttaaacagtcctgatcaaaaatat
ctaataaaaggtgttacgggatcggggaagacagaagtatatataagactagttgaagaa
atgttaaggcaaaataaaagtacaattgttttagttccggaaatttcattaacccctcag
atgattgaacgatttaagggacgatttggagaaaatgttgcgctttttcatagcaggtta
agtgatggtgaaagatttgatgagtggtatagagtaaaagaagggaaagctaaattagtt
ataggagcacgaagtgccttgtttttgccgcttcagaatcttggacttattataattgat
gaagaacatgaaaatacatataaatcagaacataatcctaaatatcatactagagaagta
agtgagttcatatgtgaaattaaggactgtaaattagttatggggtcagcaactcctagc
attgaaagttactacaaagctattcgtggtgaatataaactaatagaaatgcataaaaga
actaatgggaaagaaatgccgcatatggaaatagtagatatgagggaagaattgaagagt
aagaatttatcattgttcagtaggaaacttttggctgaaatagaggcaactttaaaagat
aagaagcaggtaattttgtttctaaacagaagagggtattcaacatttatttcgtgtaga
agttgtggatatgtatttaaatgtccagaatgcgatgtttctatgacgtaccataaaaat
ggatatttgatatgtcattactgcggaagggcagagaaatcaaaaactgtatgtccaaaa
tgtaatagtaaatatgtgaaattttttggagcaggaacagaacgcgttgaattagaagtg
aaaaaatatttcccgaaatcaagagtattaagaatggatgttgatactacacgacataaa
aattctcatgaatcaatttataattgttttaaaaatggagaagcagacatcttaattgga
acacaaatggtgtcaaaaggattagattttaaaaatgttacactggttggagttttagcg
gcagacatgtctttaaatttgcctgattacagagcatctgaaagaacatatcaaataata
acgcaggttgcaggcagatctggaagaggtgaagatgaaggcaaggtaatagttcaaagc
tatactccaaaccattatagtttaaagtgtgctcaagaagaggattatgaatctctattt
aaagaagaaataaagattagaaggttgatggaaaatcctccttttggtaaaatattatta
attgttggatcttcaaaatttgaagaaaaattaacaaaatttatgtatactttagaagct
gatttgaaaaaattagtagtagatgatcttactattctcggaccggttccttgtataatt
tctaaattaaaagaaaattacagatggcagataataataaaaggaaattttgatgatgag
tttagtgaaaaagttaaagatacactttatctattaaataagagtgtatataatgaaata
agggttagtatagatattaatcctaacaatatgacatag
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