Clostridium diolis: F3K33_06475
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Entry
F3K33_06475 CDS
T06237
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdy
Clostridium diolis
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdy03016
]
F3K33_06475 (truB)
Enzymes [BR:
cdy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F3K33_06475 (truB)
Transfer RNA biogenesis [BR:
cdy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F3K33_06475 (truB)
Prokaryotic type
F3K33_06475 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QES72477
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All DBs
Position
1424262..1425161
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AA seq
299 aa
AA seq
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MKDTKTSQINGVLNIFKNKGMTSFDVVRKIKFLANEKKVGHTGTLDPEATGVLPVCLGKA
TKTIDYIMNSNKVYEVKFLLGVKTTTYDLEGEILEKNEIDHIKSDEVSEVALSFIGEYDQ
VPPMYSALKKNGVRLYELARKGIEVEREARKVRIFNISDLKIELPYVYMKVACSKGTYIR
SLCYDIGEKLKVGAAMAELNRSETSIFKQLDSVNIDDLTKENIQDYIMTIEDALSFYPKI
TVKSTFTKLLINGVKVFDKRLTNEKREKNVLYRVYDSEGIFIGIGKQDDDGFKIEKLLL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatacaaaaacttcacagataaatggagtattaaatatattcaaaaataaagga
atgacttcctttgatgtagttagaaaaataaaattcttggctaacgaaaagaaagtcggt
catactggaacattggacccagaagctactggagtccttccagtctgccttggaaaagct
acaaaaactattgattatatcatgaacagtaataaggtatatgaggtgaaatttctactt
ggagtgaagacaaccacatatgaccttgaaggtgagatattggagaagaatgaaatagat
catattaagagtgatgaagtttcagaggtcgcattatcctttatcggagaatatgaccaa
gttccacctatgtattctgcccttaaaaaaaatggagtaaggctctatgaattggctagg
aaaggtattgaggttgaaagagaagcgagaaaagttagaatatttaatatatcagatttg
aagattgaattaccttatgtatatatgaaagtagcttgttcaaaagggacatatattaga
agtttatgttatgatattggtgaaaaactaaaagttggagcagctatggcagaattaaat
agatctgaaacatctatttttaagcaattagatagtgtaaacatagatgatttaactaag
gaaaatatacaagattatattatgactatagaggatgcactttctttttaccctaaaatt
acagtaaagagtacatttactaaattattaataaatggagttaaagtattcgataagaga
ttgacaaatgaaaaaagagaaaaaaatgttctatatagggtatatgatagtgaaggcatt
tttataggaattggaaaacaagatgatgatggattcaaaatcgaaaaattgttgctttag
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