Clostridium diolis: F3K33_09045
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Entry
F3K33_09045 CDS
T06237
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cdy
Clostridium diolis
Pathway
cdy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F3K33_09045 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdy03019
]
F3K33_09045 (recQ)
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_09045 (recQ)
Enzymes [BR:
cdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F3K33_09045 (recQ)
Messenger RNA biogenesis [BR:
cdy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F3K33_09045 (recQ)
DNA repair and recombination proteins [BR:
cdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F3K33_09045 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
HTH_40
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QES72964
LinkDB
All DBs
Position
1985527..1987977
Genome browser
AA seq
816 aa
AA seq
DB search
MDNVALNYLEKYYGYKSFRKGQEDIISKIINGEDVLAIMPTGGGKSICYQMPALMLEGIT
IVISPLISLMKDQVDTLKDMGIKGALINSTLSAIEEKEVINNLENSEIKILYIAPERLES
FEFLSVISKCNISQIAIDEAHCISQWGHDFRGSYRKISNFISLLQKRPIITAFTATASQE
VREDIINLLKLNNPKVFITGFDRENLSISVIKSGNKKEYLYKYIENNKEVSGIIYAATRK
EVNNLYESLQAKGYNVTCYHAGLSEHTRKENQENFIYDRAGIMIATNAFGMGIDKPNIRY
VVHYNMPRNIESYYQEIGRAGRDGEKSECVLLFSPQDVQVQKYLIENSIEDVERKNNQYR
KLQQMMDFVYSNYCYRKYVLEYFGETYNGQCDNCSNCLSEGEFVDKTIEAQKVLSCIYRM
KVKFGIGMLVDVLRGSKNKKVIQFHFNELSTYGLMKEYSAEDLKNFINTLISHGYINVVE
GTYPVLSLNDRSRRVLTSQEKVQLKEFRVEKKASEENELFEILRNLRQELAKENNVPPYI
IFGDVTLKEMTVNYPISKYEMLKVSGVGEVKYNKYGKVFEDVIRNFVEEHEIAISDHDEG
LLDEQKSINKDEESRIEVKTDLELYERLDNARKEFAKEERALPQAILTMNTLKEISGRCP
SSLDELKDITGMGPKKISLYGEKIINIVNEYLSENDRKVEWIERKRRKVIIDGETRENDQ
ISIDMLKQNITIHEVSQKLEISISTILGYVTDYIKEFGENAFHINLEEFYNKEDEKLIID
ACQKHGYDKINVLKKELPSHIKYESIRAVILKKYYL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggataatgtagctttaaattatttggagaaatattatggatataagtcatttagaaaa
gggcaagaagacataataagtaaaataataaatggagaagatgtacttgccataatgcca
actggaggaggaaagtcaatttgttatcagatgccagcattgatgctagaaggaataaca
atagtaatttctcctttaatatccctaatgaaagatcaagtagatacgctaaaagatatg
gggataaaaggcgctttaataaatagtacattgagtgctatagaagaaaaagaagtaata
aacaatttggaaaatagtgaaataaagattctttatatagctcctgaaagattagaatct
tttgagtttttgagtgttatttctaaatgtaatatttctcaaatagctatagatgaagct
cattgtatttctcaatggggacatgattttaggggaagttatagaaaaatatcaaatttt
ataagtttacttcaaaagagacctataataacagcatttactgcaactgcatcacaggaa
gtgagagaagatataataaatcttcttaaattgaataatccaaaagtctttataacaggt
tttgatagagaaaacttatctatcagcgtgattaaaagtggtaacaaaaaggaatattta
tataaatatatagaaaataataaagaagtttcaggcattatatatgctgcaactaggaaa
gaagtcaataatttatatgaatctttgcaagcgaaagggtataatgtgacttgctatcat
gcgggattatctgaacatactagaaaagaaaatcaagaaaattttatatatgatagagct
ggtattatgatagcaaccaatgcttttggaatggggatagacaaacctaatataagatat
gttgtacactataatatgccaagaaatattgaaagttactatcaagagattggaagagca
ggaagagatggagaaaagagcgaatgcgtattattattttcgcctcaagatgttcaggtc
caaaagtatttaatagaaaactcaatagaagatgtagagagaaagaacaatcaatataga
aagcttcaacaaatgatggattttgtatatagcaattattgctatagaaaatacgttttg
gagtattttggagaaacatataatgggcaatgtgataattgcagtaattgtttgagtgaa
ggagagtttgttgataagacaatagaagcgcaaaaagttctttcatgtatatacaggatg
aaagttaaatttggaattggaatgcttgtagatgtgcttagaggatctaaaaataaaaaa
gttattcaatttcattttaacgagctttctacttatggattaatgaaagaatattcagca
gaagatctcaaaaactttattaatacattgatttctcatggatatattaatgtggttgaa
ggtacatatccagtgttgagtttaaatgatagatcaagaagagtattaacatctcaagaa
aaagttcaattaaaagagtttagagtagaaaagaaagctagtgaagaaaatgaacttttt
gagattcttagaaatttaagacaagaactggcaaaggaaaacaatgttccaccatatata
atattcggtgacgttacactaaaagaaatgactgtaaattatccgatatcaaaatatgaa
atgcttaaagtttctggagttggagaagttaaatataataaatacggaaaagtatttgaa
gatgtaatacggaattttgtagaagaacatgaaattgctatatctgatcatgatgaaggc
ttgctagacgaacaaaagagtataaataaagatgaagaatctagaatagaagttaaaaca
gacttagaattatacgagagactagacaatgcaagaaaagaattcgctaaagaagaaaga
gcattaccccaagcaatactgacaatgaatactctgaaggaaataagtggaagatgcccg
agttctttagatgaattaaaagatataacaggcatgggacctaagaaaataagtttgtat
ggagaaaagataataaatatagtaaacgaatatttgtcagaaaatgatagaaaagtagaa
tggattgaaagaaaaagaagaaaggttataattgatggagagactagggagaatgatcaa
atctcaatagatatgcttaagcagaacataactatacatgaagtatctcaaaaattagag
atctcaatttcaactatcctaggatatgtaacagattatataaaagagtttggagaaaat
gcatttcatataaatttggaagaattttataataaagaagatgaaaagctaataatagat
gcatgccaaaagcatggatatgataagataaatgtactaaaaaaagaactaccttcacat
ataaaatatgaaagcataagagctgtaattttaaaaaagtactatttgtag
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