Clostridium diolis: F3K33_10885
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Entry
F3K33_10885 CDS
T06237
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cdy
Clostridium diolis
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdy03000
]
F3K33_10885
Transcription factors [BR:
cdy03000
]
Prokaryotic type
Helix-turn-helix
Other families
F3K33_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
Mg_chelatase
AAA_2
PAS_8
AAA_3
HTH_30
AAA_16
PAS
AAA
PAS_7
DUF134
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QES73306
LinkDB
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Position
2419948..2421912
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AA seq
654 aa
AA seq
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MENKELLIENSHKRSESYGVEKNSDHSNKILTGEELENILTINKELIEVSKIYIDMVFSA
VMDNEFIIVLTDKNGCILYIKGAEENNSKLGGNNLEVGAYMDEQSIGTNAMGTAIKEDRC
IQITATEHYIKRFHNLTCSAAPIHNTKGEIIGTLNLTGRRDMKHPHTLGLVVFGVKAIEN
ELDKKGIRDILNQTYNYMESVIDNVDKGIMIVNKEYKVININKLGVEIFNIDKDLIISQD
IHYILPDLGNVIEELENHNGDIIKELKLKHTSRHKIRLVFKGLKHKENIIGMVVTISYEK
EGKDNKNATGAFFTFNDIIGDSAAIVNVITNCKVIANSPSTVLIQGESGTGKEILAQAMH
NYSVRRRNKFVAINCGAIPANIIESELFGYEDGTFTGGKRGGNPGKFEIASGGTLFLDEI
GEMPLDAQVKLLRVLQNGRVTRLGGSKEIPIDVRVIAATNKNLKREVQKGNFREDLYYRL
CVIPITLPPLRERKGDVKMLIDFFLRIKSFQLNKSIPELDKSLYNKLLDYDWPGNIRELE
NYIENIVNLDGRSSFNLWEFEDNQSFETDKTYDRKILKDGFLNKEIWEDNKTNGLLKNVN
TEKTEYMVNTLNLEELEMKAIHEAVRINDHNMTKAAKTLGISRNTLYLKLKKHK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagagctattaattgaaaactcacataagagaagcgaaagttatggagtt
gaaaaaaattcagatcattcaaataagattcttactggtgaagaattagaaaatatatta
actattaataaagaattaatagaagtatctaaaatatacatagatatggtattttcagca
gttatggataatgaatttattatagtgttaacagataaaaatgggtgcattctatatatt
aaaggagcagaagaaaataatagtaagcttggggggaataatcttgaagttggggcttat
atggacgagcaaagtataggtactaatgccatggggacagcaattaaagaagacaggtgt
attcagataactgcaactgagcattacataaaaaggttccacaatttaacatgctctgct
gcacctattcataatacaaagggagaaattattggaacattgaacttaacaggtagaaga
gatatgaagcatccacatactttaggcttagttgtttttggtgtaaaggcaatcgaaaat
gaattggacaagaagggtatacgtgatatattgaatcaaacctataattatatggagagc
gttatagataatgttgataaaggtattatgatagtaaataaagagtataaagtaataaat
ataaataaacttggagtagagatatttaatatagataaggatttgataataagtcaagat
atacattatattttgcctgatttgggaaacgtaatagaagaacttgaaaaccataacggt
gatattataaaggaattaaaattaaagcatacaagcagacataaaataaggttggttttt
aaagggcttaaacataaagaaaatattataggtatggttgtaacaataagctatgaaaaa
gaaggaaaagacaacaaaaatgcaacaggggcattttttacttttaatgatataattggt
gatagtgcagccattgttaatgtgataactaactgtaaggttattgccaatagtccttca
actgttctaattcaaggagaaagtggaacaggtaaagaaatattagcacaagctatgcat
aattatagtgtgcgaagaagaaataaatttgttgcaataaattgtggagctataccagct
aatataatagaaagtgaattgtttgggtatgaggatgggacttttacaggaggaaaaaga
ggcggaaatccaggtaagtttgagattgcaagcggaggtactttgtttttagacgaaatt
ggggaaatgccacttgatgcacaggttaagctgttaagagtacttcaaaatggaagagtc
acaaggcttggtggaagcaaagagattcctatagatgtaagagttatagcagctactaat
aaaaatttaaaaagagaagttcaaaaagggaattttagagaagatttatactatagatta
tgtgtaattccaatcactttaccgcctttaagagagagaaaaggcgatgtaaaaatgctt
attgacttcttcttaagaattaaatcctttcagctgaataaatcaataccagagcttgat
aaaagtttatataataagttattagactatgattggcctggaaatataagagagcttgaa
aattatattgagaatatagtaaatttggatggacgatcatcttttaatttatgggaattt
gaagataatcaaagttttgagacagataaaacatatgataggaaaatattaaaagatggc
tttttaaataaagagatatgggaagacaataagactaatggtttacttaagaatgttaat
actgaaaagactgagtatatggtaaatactttaaatctagaagaactagaaatgaaggca
attcatgaagctgtaagaataaatgatcataatatgacaaaagctgctaaaactttaggt
ataagtagaaacactctatacctaaaattaaaaaaacataaataa
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