KEGG   Clostridium diolis: F3K33_19500
Entry
F3K33_19500       CDS       T06237                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
cdy  Clostridium diolis
Pathway
cdy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cdy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    F3K33_19500
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:cdy02022]
    F3K33_19500
Two-component system [BR:cdy02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   F3K33_19500
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_2 AAA MCM PDE8A_N AAA_3 AAA_16 bpMoxR AAA_22 DUF815 Parvo_NS1 AAA_7 nSTAND3 HTH_30 ATPase OKR_DC_1_N
Other DBs
NCBI-ProteinID: QES74863
LinkDB
Position
complement(4318311..4319729)
AA seq 472 aa
MFIKRKADYNMTESVRVLVADDELSLRMVLQTALNKAGYEVDTVKNGKEALCMAQENHYD
VAILDIRMPEVDGLQAFYEIHKIKPSLPIILMTAFGSSETAVNAMKHGAYDYILKPFNLD
EVKIIVSRAIRMQQLTKEVVYLTQEVQEMGMTAMTPGKIVGESSKIQEVYKIIGRVANSK
ATVLLTGESGTGKGMVAKAIHYASDRREKPFIQVNCGSIPEGLLESEIFGHEKGAFTSAF
FQKPGKFELAEGGTLFLDEIAEMSPNLQVKLLRVLQEKEFERVGGTKTFHTNVRIIAATN
RDLNKEISEKSFRKDLYYRLNVVSICLPPLCERGEDIVLLADYFLKRFSVEVGRNGMFFA
PEVLDIFRNYSWPGNIRELENAVEHAIIMSNTRVILPENLPLSIKVEDVEADGTIILGDD
SFKPLREVLLEVEKRHISEAIERTGGNRTQAAKLLQISRRALLYKINENNID
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgtttataaaaagaaaggctgattacaatatgacagaaagtgttcgtgttttagtagct
gatgatgagctaagcttgagaatggtacttcaaacagcattaaataaggctggatatgaa
gtagatactgttaaaaatggaaaagaggcactttgtatggcgcaggaaaatcactatgat
gtcgctatccttgatatccgtatgccagaagtggatgggttgcaggcattttatgaaatt
cataaaattaagcctagcttgccaattattcttatgactgcatttggaagttcggaaact
gcagttaatgctatgaaacacggtgcttatgactatatattaaagccttttaaccttgat
gaagttaaaattattgtaagtagagctattcgcatgcaacaattgactaaagaagttgta
taccttacgcaggaagtacaagaaatgggaatgacagcaatgaccccaggtaaaattgtt
ggggaaagctctaaaatccaagaagtatataaaataattggacgagtagcgaattcaaaa
gctacggtattgctaacaggcgaaagtgggacaggtaaaggaatggttgctaaggctatt
cactatgcgagtgacaggagagaaaagccattcattcaagtgaattgtggttcgattcca
gaaggtttattagagagtgagatatttggacatgagaagggagcatttacaagtgcattt
tttcaaaaaccagggaaatttgaactggctgaaggagggacactttttttagatgagatt
gcggagatgagtccaaatcttcaggtaaaacttcttagggtgttgcaagaaaaagagttt
gaacgtgttggtggtacaaaaacatttcatacaaatgtacgtattattgcagcaacaaac
cgtgatctgaataaagagatatctgaaaagtcttttcggaaggatctatattatcgactt
aatgttgtttcaatatgtttacctccactttgcgaaaggggagaagatattgttttacta
gctgattactttttaaaacgtttttctgtagaagtaggacggaatggtatgtttttcgct
ccagaggttttggatatttttcgtaactattcttggccaggaaatatcagggaattagaa
aatgcagtagaacacgctattattatgagcaacacccgtgttattttgccggaaaatctt
ccacttagcataaaagtagaagatgtagaagcggatggtaccattattctgggagatgat
tctttcaaacctttgcgagaagtattgctagaagttgaaaagcgtcatatatccgaagct
atagaacgaacaggtggaaaccgcacacaggctgcaaagctccttcagatttcacggaga
gcccttctgtataaaattaatgagaataatatcgattaa

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