Clostridium diolis: F3K33_20340
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Entry
F3K33_20340 CDS
T06237
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cdy
Clostridium diolis
Pathway
cdy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F3K33_20340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdy02000
]
F3K33_20340
Transporters [BR:
cdy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
F3K33_20340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
VID27_N
Motif
Other DBs
NCBI-ProteinID:
QES75011
LinkDB
All DBs
Position
complement(4495644..4497320)
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AA seq
558 aa
AA seq
DB search
MIRRKNKILAGMLSMLLSILLLNGCGSTSAEIPTNSSADNQSSSGESVLRYAVESSPKGL
FSPLLSNTTYDNNVNSLVYSPLILLDENNDFKPGLADKYEFSGDNLTVTFNLRKDVKWHD
GEDFTADDVAFTFTSMADQKYTGSRFNEISKIVGAQDYHDGKADSISGIKVIDKYTISFT
YSKVYAPALSNFSQRGIIPKHIWSKVNVADWDKQSDLLNKPVGTGPYKLIDFKPDQYVEL
AKNDSYFGGAPQIDKFIFKVANTETELSELAKGDLDIVELSSTKEEDLKMLKDAGIKIEE
KPSANYQFMTMNSNRDFFKDKRVRQAITYAINRKGIVDSLLGEHGQVINAPISLAGWAYP
KSGLNTYDYNADKAKELLKEAGWIENNGVLEKDGKKFEVDLMVPTGNKVREQSAPIIQQN
LKDVGIIVNISTMDVASAMAKTKGQGDYDMGLLGFTLEVDPGDADRYWSSSIANNSQFNF
SNFINAKSDEFIEKAATTIDRNERKEVYAKWGQLLNDEAPYVFLYSQNAIRAHNPKLQGY
KYSAYSVFPDIQNWTISK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgattcggagaaaaaataaaatattggctggtatgctttcaatgctattatctatattg
ctattaaacggttgtggaagtacatctgcagaaataccaactaattcatcagctgataat
caatcatcaagcggtgaatctgtattaagatatgctgtagaatcttcacctaaaggtttg
tttagcccattattatcaaatacaacgtatgataataatgtaaatagcttggtatattca
ccattgattttattggatgagaataatgattttaagcctggacttgcagataaatatgaa
ttttcaggtgataatcttactgtgacattcaatttaagaaaagatgtcaaatggcatgat
ggagaagattttacagcagatgatgttgcatttacatttactagcatggctgatcaaaag
tacacaggatcaagattcaatgaaatttccaaaatagttggtgcgcaggattatcatgat
ggtaaagcagattctataagtggaattaaggttattgataaatataccataagctttaca
tattctaaagtttatgcgccagcattatcaaatttttcacaacgtggaattattccgaag
catatttggagtaaagtaaatgttgctgattgggataagcaaagtgatttgcttaataag
cctgtaggaaccggaccatataagcttatagattttaaaccagaccaatatgttgaatta
gctaaaaacgatagttattttggaggagctccccaaatagataaatttatttttaaggtt
gctaatacagaaacagagctttcggagttagcaaaaggggatcttgatattgttgaactt
tcaagcacaaaagaagaagatttaaagatgttaaaagatgcaggtataaaaatagaggag
aaaccaagtgcgaattatcaatttatgactatgaatagcaatagagatttctttaaagat
aaaagagtacgtcaagcaatcacctatgcgataaacagaaaaggcatagttgatagttta
ctaggtgaacatggacaagtaataaatgcacctatatctctagctggatgggcttatcct
aagtcaggacttaatacctatgattataatgcagataaggctaaagaattactaaaagaa
gctggatggattgaaaataatggagttcttgaaaaggatggtaagaaatttgaagtggat
ttaatggttccgacaggaaataaggttcgtgaacaaagtgctccaattattcagcaaaat
ttaaaggatgtaggtattatagtaaatatcagtactatggatgttgcttctgctatggca
aaaactaaaggacaaggagattatgacatgggattattaggatttaccttagaagttgat
ccaggtgatgccgatcgttattggtcttcaagcattgcaaataattctcaatttaatttt
tcgaattttataaatgctaaaagtgatgaatttatagaaaaggctgcaactactattgat
cgtaatgaacgtaaagaagtttatgcaaaatggggacaattattgaatgatgaagcacca
tatgtatttttatattcacaaaatgctattcgtgctcataatcccaaattgcaaggatat
aagtactcagcatattctgtatttccagacatacaaaactggacgatttcaaaatag
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