Clostridium diolis: F3K33_24900
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Entry
F3K33_24900 CDS
T06237
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cdy
Clostridium diolis
Pathway
cdy03030
DNA replication
cdy03430
Mismatch repair
cdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F3K33_24900
03430 Mismatch repair
F3K33_24900
03440 Homologous recombination
F3K33_24900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdy03032
]
F3K33_24900
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_24900
Enzymes [BR:
cdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F3K33_24900
DNA replication proteins [BR:
cdy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F3K33_24900
DNA repair and recombination proteins [BR:
cdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F3K33_24900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QES75879
LinkDB
All DBs
Position
complement(5651785..5655360)
Genome browser
AA seq
1191 aa
AA seq
DB search
MEEKQFCHLHLHTEYSLLDGSGKIGKLMKKAKELGMKSIAITDHGVLYGLVDFYKAAKEN
DIKPILGCEVYVVPKSRHIKQPDKENSTYHLVLLVKNQIGYENLMKIVSVASIEGFYYKP
RIDYEYLRKHSEGLIALSACLGGEVQSYHLKGNYEKAKETALTYKEIFNGDFYIELQNHG
MEEQKRVNEENIKLSNETGIPLVATNDVHYISKEDSRSHDVLMCIQTAKTIDDPHRRRYP
SDQFYLKSADEMWDMFSYIPEALENTIKIANECSYEYKFHESKLPKFPLEEGQDPYEYLR
DTCYKGLIDRYSVFENLRNQSLDYSKIEEVVANYEEAKEYVDRLEYELQVIKQMGYIDYF
LIVWDFVRFSYESGIPTGPGRGSAAGSIVAYTLGITKIDPIKYSLIFERFLNPERVSMPD
IDSDFCYERRQEVIDYVVEKYGASNVSQIITFGTMAARLCIRDVGRAMNYSYAEVDRIAK
MIPTMLGITIEKALDLNPELKLAYDTDERVKALIDVSKDLEGLPRHSSTHAAGVVIASKP
LVEYVPLQKNEEMIVTQFGMTTLEELGLLKMDFLGLRTLTVMNDAINMIRENRKIDIDLD
KIDFEDKEVYKMIGEGKTAGVFQLESPGMTSFMKELKPDSLEDIIAGISLYRPGPMAEIP
RYIEGKKNSEKVTYLTKELEPILGVTYGCLVYQEQVMQAVRDLAGYSMGRSDMVRRAMSK
KKHKVMEEERKNFIHGIVENDEVIVPGCVRNGISEEIANKIFDSMMDFASYAFNKSHAAA
YAVVGYQTAYLMKYYPVEMIAAMLNSIMGISEKVAYYIGIAEELGIQVLPPNINESFSKF
TVKENKIRFGLAAIKNVGTNVVASIVKAREEKGKFESLVDFINKMDPSSINKRAVECLIK
AGALDDFDVFRSKMLAVHEKLIDNISSDKRRNIDGQISLFASEELKNPEVNYPNIKEFTK
RNLLAMEKEMTGLYITGHPLDDYAQSLKMQTTNEISKIFLVQETLDDSLESDMGEINMFN
RQDALQDNDRVILGGILASVNQKVTRNNSIMAFLKLEDLTGTIEVIVFPKTLEKVKELCV
TDSLVIVKGRLSLKEDEPPKLICESIEPLEKVNTSKVYLRVDDKVAATVLSKKLKELLIK
EYIGDTPIYIFESKGKQKFRVPRDRWISLDSDVMNLLRQTLGDENVKVLDS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaacaattttgtcatttacatttgcatacagaatatagtttacttgatgga
tcaggaaaaataggaaagctcatgaagaaggcaaaagaattaggcatgaagagtattgct
attactgatcatggagttttatatgggcttgtagatttctataaggcagcaaaagaaaat
gatataaaacctattttaggatgtgaagtttatgtcgtaccaaagtctagacatataaag
cagccagacaaagagaattcaacttatcatttggttttattagtaaagaatcaaattgga
tatgaaaatctaatgaaaatagtatcagttgcatctattgaaggattttattataagccc
agaatagattatgaatatttaagaaaacatagtgaaggattaattgctttgagtgcatgt
ttaggtggtgaagtacaatcttaccatcttaaaggcaattatgaaaaagcaaaagagaca
gccttaacatacaaagaaatttttaatggtgacttttatattgagttacaaaatcatgga
atggaagaacaaaagagagtaaatgaagaaaatataaagttatctaatgaaactggtata
ccactagttgctactaatgatgttcactacataagcaaggaagattctagatcacatgac
gtactaatgtgtatacaaacagctaaaaccattgatgatcctcatagaagaagatatcct
tcagatcagttttatttaaaatcagcagatgaaatgtgggatatgttttcctatattcct
gaggctttggagaataccattaagatagccaatgagtgtagctatgaatataagtttcac
gaatctaagcttccaaaatttccgctagaagaaggtcaagatccttatgaatatcttaga
gatacttgctataaaggtctgatagatagatatagtgtatttgaaaatcttagaaatcag
agtttggactatagtaaaattgaagaagtagtagcaaattatgaagaagctaaagaatat
gttgatagattagaatatgagcttcaagtaataaagcaaatgggatatattgactacttt
ttaattgtatgggattttgttagattttcctatgaaagtggaatacctacagggccaggt
agaggatccgcagcaggttcaatagttgcatatacgttaggaattacaaaaatagatccg
attaagtatagtttaatctttgaacgtttcttaaatccagagagagtatccatgccagat
atagatagtgatttttgttatgaaagaagacaagaagtcattgattatgtagttgagaag
tacggagcaagtaatgtttcgcagataataacgtttggtacaatggcagctagactatgt
atacgagatgttggaagagctatgaattatagttatgcagaggttgatagaatagctaag
atgataccaacaatgcttggaataactatagagaaggcgttagacttaaatccagagctt
aaattagcctatgatacagatgaaagagtaaaggcgttaatagatgtttcaaaggattta
gagggacttccaaggcattcttctactcatgctgctggtgttgttatagcatcaaagcca
ttagttgaatatgttccattacagaagaatgaagaaatgatagtaacccaatttgggatg
acaacattagaagagcttgggctacttaagatggatttcttaggacttagaacgttaacg
gttatgaatgatgctattaatatgattagagaaaatagaaagatagatattgatttagat
aaaatagattttgaagacaaagaagtatataaaatgataggggaaggtaagactgctgga
gtgttccagcttgaatcgccaggaatgacttcattcatgaaggaattaaaacctgattca
ttggaagatattattgcgggaatatcgctctataggccagggcctatggctgaaattcct
agatacatagaaggaaagaaaaattcagaaaaagttacgtatttaactaaagaattagag
cctatattaggtgttacgtatggatgtttagtatatcaggaacaagtaatgcaggctgtt
agagatttagctggatactccatgggacgtagtgatatggttagaagagctatgtcaaag
aaaaaacataaagtcatggaggaagaaagaaaaaatttcattcatggtattgttgaaaat
gatgaagtaatagtaccaggatgcgtgagaaatggaatttcagaggaaatagctaataaa
attttcgattctatgatggactttgcttcgtatgcatttaataaatcccatgcagcggca
tatgcagttgttggatatcaaacagcatatcttatgaagtactatccagtagagatgatt
gcagcaatgcttaattcaatcatgggaatcagtgaaaaggtagcatactatatcggcata
gcagaagaacttggaatacaagttttaccacctaatataaacgaaagtttttcaaaattc
actgttaaagagaacaagattagatttggattagcggctataaagaatgttggaactaat
gttgtagcaagcatagtgaaagcaagagaagaaaagggtaaatttgaatcgttagttgat
tttataaataaaatggatccatcatcaataaataagcgtgcagttgaatgtttaataaag
gctggggctctagatgattttgatgtttttagatctaagatgttagctgttcatgaaaaa
ttaattgataatatatctagtgataagagaagaaatattgatgggcaaataagcttattt
gcaagtgaagaattaaagaatccagaagtaaactatcctaatattaaggaatttactaag
cgtaatttattagctatggaaaaggagatgacgggactttatattactgggcatccccta
gatgactatgctcaaagtctgaaaatgcagacaacaaatgagatttctaaaatattttta
gtacaggaaaccttagatgattctctagagagcgatatgggtgaaattaatatgtttaac
aggcaggatgccttacaagataatgatagagtaatccttggaggaatacttgctagtgtt
aatcagaaggtaacaagaaataattctataatggcattcctaaaacttgaagacttaact
ggaacgattgaagtaatagtgttccctaaaactttggagaaagtaaaagaattatgcgta
acagatagtttggtaatagttaaaggaagattaagtttgaaagaagatgaaccaccaaaa
cttatttgtgaaagtatagaacctttagagaaggtcaatacttcaaaagtatatttaaga
gtcgatgataaggtggcagctactgtcttaagtaaaaaattaaaagaattattgataaag
gaatatattggagatacgcctatttatatatttgagagcaaaggaaaacaaaagtttagg
gtgccaagagatagatggatttccctagatagtgatgttatgaatttattgagacaaact
ttaggagatgagaatgttaaagtattagattcataa
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