Clostridium diolis: F3K33_24935
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Entry
F3K33_24935 CDS
T06237
Name
(GenBank) penicillin-binding protein 2
KO
K05364
penicillin-binding protein A
Organism
cdy
Clostridium diolis
Pathway
cdy00550
Peptidoglycan biosynthesis
cdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F3K33_24935
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdy01011
]
F3K33_24935
Peptidoglycan biosynthesis and degradation proteins [BR:
cdy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
F3K33_24935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
PBP_dimer
YdfZ
Motif
Other DBs
NCBI-ProteinID:
QES75886
LinkDB
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Position
complement(5662382..5663851)
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AA seq
489 aa
AA seq
DB search
MKNVSNSIKQVMVVFLFCFVALISYIAYFQVFSAPTIAESEGNQRLWARRNEVLRGTIYD
RNKNPLTTSARVDALTQKRTYVNGDLYVHALGYVDPRYGLTGLEANYDSELTTYNKLTNN
ILNLTKDFSIDKLKSMFKNRKEDEVKVGNGVITTLDPTLQKIAYDALGSNKGAVVALNPK
TGEVLAMVSKPTYNPNDLEGSMKASNEDSPFINRAVSGKYPPGSTFKTVTLSSALENMPG
VTNRTFNDTGKIVFNDKQSLSNDNGEVNGEIDLKDAYRLSSNFVFGTLAMELGNDKLKAT
AEKFGFNNTVESDGFKIDQSQFPKLSKAEIGSIAQSGIGQSSILATPMEMALVASTVADD
GKMMEPRLVSQVVDKDGNVVKTVEPKVNKQVISSANAAIIKDYMKNLVDSRIDSTWSYFQ
GTDAAGKTGTADYNLANGESAKPHSWFIGLAPASNPKIAVAVIVENGGYGASAAAPIAGK
LIRQAVIGN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatgtttctaatagtataaaacaggtaatggtagtttttttattttgctttgta
gctcttatctcgtatattgcatattttcaagttttttcggctcctactatagctgaaagt
gaaggtaatcaaaggctttgggcaagaagaaatgaagttttgaggggaaccatatatgat
agaaataaaaatccgcttacaacaagtgcaagggtagatgcgctaacacaaaaaagaact
tatgttaacggagatttatatgttcacgcactaggatatgtagatccaagatatggattg
acaggattagaggcaaattatgatagtgagttaaccacatacaacaagcttactaacaat
attttaaatctaactaaagattttagcatagataagttaaaatcaatgtttaagaataga
aaagaagatgaggtcaaagttgggaatggtgttataactacattagatccaacacttcaa
aaaatagcatatgatgcacttggaagtaataagggtgcagtggtagccttaaatccaaaa
acaggagaagtattagctatggtttctaagccaacgtacaatccaaatgatttggaaggc
tcaatgaaagcttctaatgaagatagtccgtttataaatagagcagtatcaggaaaatac
ccgccaggatcaacatttaaaacagtaactcttagcagcgcattagaaaatatgcctggg
gttacaaatagaacttttaatgatacaggtaaaatagtatttaacgataaacagtcattg
agcaatgataatggagaagttaatggtgaaatagatttaaaggatgcctatagattatca
agtaattttgtatttggtacattggcaatggagctaggaaatgataagttaaaagctact
gcggagaagtttggttttaataatacagtagaatctgatggatttaaaatagatcagagt
caatttccaaagttatctaaagcggaaattggtagcatagctcaatctggaattggccaa
agtagtattttagctacgcctatggagatggctttggttgcaagtacagtggctgatgat
ggtaagatgatggagccaagactcgttagccaagtggtggataaggacggtaatgtagtt
aagacagtggaaccaaaggtgaataaacaagttataagttcagctaatgctgcaattata
aaagactatatgaaaaatttagttgattcaagaatcgactctacttggagttattttcaa
ggaactgatgcagcaggtaagactggtacagctgattataatcttgctaatggagaaagc
gctaaacctcattcatggtttattgggcttgcaccagcgagcaatcctaagattgcagtt
gctgtaatagttgaaaatggaggatacggagcgagtgcggcagcaccgatagcaggaaaa
ttaattaggcaagcggttattggaaattaa
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