Clostridium diolis: F3K33_25095
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Entry
F3K33_25095 CDS
T06237
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cdy
Clostridium diolis
Pathway
cdy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F3K33_25095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdy03400
]
F3K33_25095
Enzymes [BR:
cdy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
F3K33_25095
DNA repair and recombination proteins [BR:
cdy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F3K33_25095
Prokaryotic type
F3K33_25095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF7421
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
QES75917
LinkDB
All DBs
Position
5697819..5698496
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AA seq
225 aa
AA seq
DB search
MSDILKNDWKNYLQSEFQKDYYINLRKFLINEYNSKTIYPNMYDLFNALHFTPYNKVKVV
IFGQDPYHGPGQAHGLSFSVNPGVKTPPSLINIYKELHTDLGCYIPNNGYLRKWADQGVL
LLNTVLTVRAGEANSHKNKGWEEFTNEVIKVLNKKETPIVFILWGNNAISKTDFITNPKH
LIIKSVHPSPLSASRGFFGSKPFSKTNNFLISTNQEPIDWQIENI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatattaaaaaatgattggaaaaattatttgcagtctgaattccaaaaagat
tattatattaatctaagaaaatttttaataaatgaatataactctaagaccatttatcct
aatatgtatgatctctttaacgccttacattttacaccttataataaagttaaagttgtt
atattcggtcaagatccttatcatggacctggccaagcgcatggattgagtttttctgtt
aatccaggtgtaaaaactccaccatctttaattaatatctataaggaactacatactgat
ttaggttgctatattccaaacaatggctatttaagaaagtgggctgatcaaggagtctta
ttgctaaatacggtacttacagttagagctggagaagctaattcccacaaaaataaagga
tgggaagaattcacaaatgaggttattaaggtgctaaataaaaaggaaacacctatagta
ttcatactttggggtaataatgctatttcaaagactgactttattactaatcctaagcat
cttataataaaatccgttcatcctagtccattatctgcatcaagaggcttcttcggaagt
aaacctttttcaaaaacaaacaattttctaatttctacaaatcaagaaccaattgactgg
caaatcgaaaatatataa
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