Corynebacterium diphtheriae 31A: CD31A_0726
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Entry
CD31A_0726 CDS
T01697
Symbol
uvrD
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdz
Corynebacterium diphtheriae 31A
Pathway
cdz03420
Nucleotide excision repair
cdz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD31A_0726 (uvrD)
03430 Mismatch repair
CD31A_0726 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdz03400
]
CD31A_0726 (uvrD)
Enzymes [BR:
cdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD31A_0726 (uvrD)
DNA repair and recombination proteins [BR:
cdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD31A_0726 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CD31A_0726 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ADDB_N
HHH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEX41405
LinkDB
All DBs
Position
726922..728973
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AA seq
683 aa
AA seq
DB search
MINLDDLDDDQRAAAEAPRGPVAILAGAGTGKTRTITYRIAHLIDRGMASPHRVLAVTFT
RRAAGEMRHRLGLMGVGGVQAQTFHSAALRQLRYFWPQVAGNLPWRIVDNKFSLVGRATR
SVGVESSTENVRDLLSEIEWAKAALITPDNYVERLNGRKTPVAAEKVAEVYRRYEQSKTT
PEGMLLDFDDLLLHTAGAIENSAAIAEEFRQQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DVTVVGDANQTIYSFTGASPDYLLGFSRKYPHATVVKLQRDYRSTPQITDLANRVIDQAV
GRIAGTRLELEGMRTAGPQPEFQEFSDEPAEAHAVALKIKQLLTQGVPASEIAILYRINA
QSATFEQALDDAGIVYQVRGGEEFFQRSEIKQAMSEIIRATQRDDLPDARGVDLERIVRA
ILAPLGLSKNEPEGARARERWQSLEALAELSLEIGQATPDLNLQGLLAALNQRANAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPISHAMKAGDHAIEEERRLFYVGVTRARE
ILYCSWAKARQEGGRATRKRTRFLDSIVPELDVSSVPPRSKRRQRCRLCGTTLNSPAERI
VGRCDQCPIGVDGEVFETLRKWRADTAHELNVPAYIVFTDATLHAIAENLPQSAEELMQI
SGIGQVKVERFGPGLLETLAQFQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattaacttggatgatcttgacgatgaccagcgtgcagccgccgaggcgccgcgtggt
ccggtagccattttggcaggcgcaggaacaggtaaaactcgtacgatcacctaccggata
gcgcacttgattgaccgtggcatggcaagccctcatcgcgtgctcgcagttaccttcacg
cgtcgcgctgctggggaaatgcggcatcgtctggggttgatgggcgttggtggcgttcaa
gcccaaacatttcactctgctgcgctgcgacaactacgctatttttggccacaggtagcc
gggaatttgccatggcgaattgttgacaacaaattttcactggtgggtcgcgcaactcgt
agcgtcggggtggaatcctcaacagaaaatgttcgagatctactcagcgaaatcgaatgg
gccaaagcagcactgatcactcctgataactatgtggaacgcctcaacgggcgcaagacc
ccagtagcagccgaaaaagtggcggaagtatatcgacgatatgagcagtcgaaaactaca
ccggaaggaatgctgctcgactttgatgacttgctgcttcataccgccggagccatcgag
aattctgctgctatcgcagaggaatttcggcaacaataccgcacgttcgttgtcgacgag
taccaggacgtgacgccactgcaacagcgggtcttagacgcatggcttggtgagcgcgat
gatgtgaccgtggtgggcgatgccaatcagacgatctactcgtttacaggcgcttcaccg
gactatttgctggggttttcacgcaaatatccccatgccacggtggtgaaactgcaacga
gactaccgttctacaccgcaaattacagatcttgctaaccgcgtgatcgaccaagcagta
gggcggatcgcagggactcggttggaattagaaggcatgcgtacagcaggaccgcaacca
gaatttcaagaattcagcgacgaacccgcagaagcacacgccgtagccttgaaaatcaag
cagcttctaacacaaggcgttcctgcctccgagattgcgattttgtaccgcattaatgcc
caatccgcgactttcgaacaagccctcgatgacgccggaattgtgtatcaagttcgtggc
ggtgaggaattcttccagcgttcggaaatcaaacaagcgatgtcagagatcatccgagca
acccagcgtgatgaccttcccgacgctcgtggagtagacctagaacgcatcgtgcgtgca
atattagcgccgctgggcttgagcaaaaatgaaccagaaggcgcccgcgcacgggaacgc
tggcagtcgttggaagctcttgcagagctgagcttggaaattggccaagcgacaccagac
ttaaaccttcaagggttattagcagcactcaaccagcgagcaaacgccaagcatcctccc
actatgcaaggggttaccttggcatccctccacgcagcgaagggcttggaatgggatgcc
gtgttcctcgtcgggcttgtcgacggcaccctgccgatctctcacgcaatgaaagccggc
gaccatgccatcgaggaagaacgccgcctgttttatgtgggcgtgacgcgtgcccgagaa
attttatattgctcgtgggcaaaagctcgtcaagaaggcggacgtgcaacacgaaagcgg
actcgttttttggacagcatagttcctgaactcgatgtttcctccgtaccaccacgctct
aaacgacgccagcgctgtcgtttatgcggcaccacattgaacagtcccgcagaacgcatc
gtaggacgctgtgaccaatgccccatcggagttgatggagaagtgtttgaaactctgcgg
aaatggcgagcggatacagcccatgaactcaacgttccggcctatattgtgtttaccgat
gccaccttgcatgcgatagccgaaaatcttccccaatccgccgaagagctgatgcagatt
tctggaatagggcaggtcaaagtagaacgttttggcccaggtctgctagaaacgcttgct
cagttccagtaa
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