Corynebacterium diphtheriae 31A: CD31A_1025
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Entry
CD31A_1025 CDS
T01697
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cdz
Corynebacterium diphtheriae 31A
Pathway
cdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD31A_1025 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdz03019
]
CD31A_1025 (deaD)
03009 Ribosome biogenesis [BR:
cdz03009
]
CD31A_1025 (deaD)
Enzymes [BR:
cdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CD31A_1025 (deaD)
Messenger RNA biogenesis [BR:
cdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CD31A_1025 (deaD)
Ribosome biogenesis [BR:
cdz03009
]
Prokaryotic type
rRNA helicases
CD31A_1025 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
AEX41702
LinkDB
All DBs
Position
1020705..1022747
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AA seq
680 aa
AA seq
DB search
MSITDNATSGENELDIKILSESQDNSQVDEGTTINNDVVADVDDSRVANTSEATDSAQKE
ADSAEKDGFESLGLPDAILKAVAKVGFETPSPIQAQTIPVLMQGHDVMGLAQTGTGKTAA
FALPILSRIDVKKRHPQALILAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQL
SGLRRGAQIIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEMLNMGFQEDVERILEDTPE
DKQVALFSATMPNGIRRLSRDYMKDPHEIQVKSQTRTNTNITQRYLNVAHRNKLDALTRI
LEVTEFEAMIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDIL
VATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRS
IERATNAKLIEMDLPTVDEVNESRKAKFADSITESLEDDQVAIFRSLIKSYAEEHDVPLE
DIAAALATQARAGSEFLMKEPPPEKRRERRDRDDRRGGRDRFDRDDRRGGRDRGSRFERN
DDMQLYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRINIFVDHTLVELPKNMDPSVID
RLSDTRISGQLIHIEKDNGRPPRRNDDGDRGGYRGGDRFDRDDRRGGRGGRDRGGYRGGR
DRNDRGDRGGYRGGRGGYRD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccagcggcgagaacgagctggacattaagattttgtcg
gaatctcaggataattcgcaggtagacgaaggcaccaccatcaataatgatgtcgttgcc
gatgtagacgactccagggttgcgaacacttctgaggccaccgactccgctcagaaagaa
gcggacagtgcagaaaaagatggattcgagtctctaggtctcccagacgcaatcctgaag
gcagtcgctaaggttggcttcgaaacgccatccccaattcaggcgcagaccattccggtg
ttgatgcaggggcatgacgttatgggcctcgcgcagacaggtacaggtaagacggcggca
ttcgcgttgccaatcttgtcgcgtatcgacgtcaagaagcgccacccacaggcgttgatc
ctcgccccaactcgcgaacttgctttgcaggttgcagactccttccagtccttcgcagat
catttgggcgacatccacgtgctgccaatctatggcggtcaggcttacggcattcagctg
tccggcctgcgccgtggcgcacagatcatcgtgggtactccaggtcgtgtgatcgaccac
ttggagaaaggctccctcgacatttccaacctccgcttcctcgttctggacgaggcagac
gagatgcttaacatgggcttccaggaagacgttgagcgcattttagaggacaccccagag
gacaagcaggttgctttgttctctgccaccatgccaaatggtattcgtcgtttgtcccgt
gactacatgaaggatcctcatgagatccaggtgaagtcgcagacgcgcaccaacacgaac
atcactcagcgttacctcaacgttgcacaccgcaacaagctcgatgccttgactcgtatc
cttgaggtcactgagttcgaagccatgatcatgttcgtgcgtaccaagcatgaaactgaa
gaagtcgctgaaaagcttcgcgcgcgcggattctccgctgccgctatcaacggcgacatc
gctcaggctcagcgtgagcgcaccgtcgaccagctcaaggacggtcgcctcgacatcctc
gttgctaccgacgttgctgcccgtggcctcgacgttgaacgcatcactcacgtgttcaac
tacgacattccaaacgacacggaatcctacgtccaccgcattggtcgtaccggtcgtgca
ggtcgttctggtgaagcaatcttgtttgtcactccacgtgagcgtcgcatgttgcgttcc
atcgagcgtgccaccaacgcaaagctgatcgaaatggatctgccaaccgttgatgaggtc
aatgagtcccgtaaggcaaagtttgctgactccatcaccgagtctcttgaagacgatcag
gtagcaatcttccgtagcctgattaagtcctacgcggaagagcacgatgttccactagaa
gacatcgccgccgcattggctacccaagcacgcgctggttccgaattcttgatgaaggag
ccaccaccagagaagcgccgcgagcgtcgtgaccgcgacgatcgtcgtggcggacgcgac
cgcttcgaccgcgatgaccgacgtggcggccgtgaccgtggctcccgcttcgagcgtaac
gacgacatgcagctctaccgcctagcagttggtaagcgccagcatgttcgccctggtgcc
atcgttggtgctctggcaaacgaaggtggcctgtccaacaaggacttcggtcgcatcaac
atcttcgttgaccacaccttggtcgagttaccaaagaacatggatccaagcgtgatcgat
cgcctcagcgatacccgtatctccggccaattgatccacatcgaaaaggacaatggccga
ccaccacgtcgtaacgacgacggtgaccgcggcggataccgtggcggcgaccgcttcgac
cgcgacgatcgtcgtggtggacgtggcggacgcgaccgcggcggataccgtggcggacgt
gaccgcaacgaccgtggtgatcgcggtggctaccgaggtggccgcggcggataccgcgac
taa
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